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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73961211
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISRDIVPTV FLFALLYSSL AHDASPQSEP EPGAGEIPEG ASTLAFVFDV TGSMYDDLVQ  60
   61 VIEGASKILE TSLKRPKRPL FNFALVPFHD PEIGPVTITT DPKKFQYELR ELYVQGGGDC 120
  121 PEMSIGAIKI ALEISLPGSF IYVFTDARSK DYRLTHEVLQ LIQQKQSQVV FVLTGDCDDR 180
  181 GHIGYKVYEE IASTSSGQVF HLDKKQVNEV LKWVEEAVQS SKVHLLSTDH LGQAVNTWKI 240
  241 PFDPSLKEVT VSLSGPSPGI EIRNPLGRLI KKGFGLNELL NIHNSAKVVN VKEPEAGMWT 300
  301 VKTSSSGRHS VRITGLSTID FRAGFSRKPT LDFKKTVSRP VQGIPTYVLL NTSGISVPAR 360
  361 VDRLELLSIS GSSLKTIPIK YYPDRKPYGL WNISDFIPPN EAFFLKVTGY DKDDYLFQRV 420
  421 SSVSFSSIVP DAPKVTMPKK TPGYYLQPGQ IPCSVESLLP FTLSFVRNGV TLGVDQYLKE 480
  481 SASVTWEIEK VTLSDEDTYE CIAVSSAGTG RAQTFFDVSE PPPIIQVPDN VTVLPGERAI 540
  541 LTCLVISAVD YNLTWQRNDR DARLADPARM RSLANSSLEL RTVKFNDAGE YQCVVSNEGG 600
  601 SSAASVFLTV QEPPKVTVMP KNQSFTGGSE VSIRCSATGY PKPKITWTIN DMFIMGSHRY 660
  661 RMTSEGTLFI KNAIPKDAGI YGCLASNSAG TDKQTSTLRY IEAPKLVVVQ SELLVALGDT 720
  721 TVMECKSSGT PLPQVKWFKG DLELRPSPFL IIDPLLGLLK IQETQDLDAG DYTCVAVNDA 780
  781 GRAAGKITLD VGSPPVFIQE PADVSVEIGS NVTLPCYVQG YPEPKIKWRR SDNMPIFSRP 840
  841 FSVSSISQLR TGALFISNLW ANDKGTYICE AENQFGKIQS QTTVTVTGLV APLIGISPSV 900
  901 TSVIEGQQLT LPCALLAGNP IPERRWIKNS AMLVQNPYIT VRSDGSLHIE RVRLQDGGKY 960
  961 TCVASNVAGT VNKTTTVDVH VLPTIQHGQQ VLSTIEGIPV TLPCKASGIP KPSIIWSKKG1020
 1021 ELISTSSAKF SAGADGSLYV ASPGGEESGE YVCTATNAAG YAKRKVQLTV YVRPRVFGDQ1080
 1081 RGLSQDKPVE ISVLAGEEVT LPCEVKSIPP PIITWAKETQ LISPFSPRHT FLPSGSMKII1140
 1141 ETRISDSGMY LCVATNIAGN VTQSVKLNVH VPPKIQRGPK LMKVQVGQRV DIPCTAQGMP1200
 1201 LPVITWFKGG SAMLVDGVQH ISNSDGTLSI DQAMLSDAGI YTCVATNIAG SDETEITLHV1260
 1261 QEPPTLEDLE PPYNTPFQER VANQRIAFPC PAKGTPKPTI KWIWNGRELT GREPGISILE1320
 1321 DGTLLVIASV TPYDNGEYIC VAVNEAGTTE KKYNLKVHVP PVIKDKEHIT NVSVLINQLT1380
 1381 NLFCEVEGTP SPIIMWYKDD VQVSESSTIQ IVNNGKILKL FKVTPEDVGR YSCKAVNIAG1440
 1441 TSQKYFNIDV LVPPTIIGAN SPNEVSVVLN HDTTLECQVK GTPFPAIHWF KDGKPLFLED1500
 1501 PNIELLDKGQ VLHLKNARRS DKGRYQCAVS NAAGKQTKDI RLTVYIPPSI KGGNVTTEIS1560
 1561 ALINSIIKLE CETRGLPMPA VTWYKDGQPV ISSSQALYVD KGQFLHIPRA QVSDSATYSC1620
 1621 RVTNVAGTAE KSFQVDVYVP PMIEGDLGAP LNKQVVIAHS LTLECKATGN PPPVLTWLKD1680
 1681 GIPVKASDNI RTEGGGKKLE IMSALEADRG QYVCVATSVA GEKEIKYKVD VLVPPAIEGG1740
 1741 DETSYFIVMV NNLLELDCQV TGSPTPTIMW LKDGQLIDER DGFKVLLNGR KLVIAQAQVS1800
 1801 DTGLYRCVAT NIAGDRKKEF EVTVHVPPTI KSSGPSERAI VKYKPITLQC IANGIPNPSI1860
 1861 TWLKDGQPVN TAQGNLKIQS SGRVLQIAKA LMEDAGRYTC VATNAAGETR QHLQLHVHEP1920
 1921 PSLEDAGKML NETVVVNNPI QLECKAAGNP LPAIKWDKDN RPLSASTGVT FLNRGQIIDI1980
 1981 ESAQITDAGI YKCMAINSAG ATELFYSLQV HVPPSISGSN SMVAVVVNNL VRLECEARGI2040
 2041 PAPSLTWLKD GSPVSSFANG IQVLSGGRIL ALTSAQISDT GRYTCVAVNA AGEKQRDIDL2100
 2101 RIYVPPNIMG EEQNISVLIS QSVELLCQSD AIPPPTLTWL KDGRPLLKKP GLSISENGSV2160
 2161 LKIEDAQVQD TGRYTCEATN VAGKTEKNYN VNIWVPPSIY GSDEPAQLTV IEGNLISLLC2220
 2221 ESSGIPPPNL IWKKRGSPVL PDSAGRVRTF SGGRQLQISV AEKSDAGLYT CVASNVAGTA2280
 2281 KKDYGLQVYI RPTISNSGNH PTEIIVTRGK SISLECEVQG IPQPKVTWMK DGRPLTKGRG2340
 2341 MEILDEGRIL QLKNIHISDT GRYVCVAVNV AGMTDRKYDL SVHTPPSIIG NHGIPENISV2400
 2401 VEKNSVSLTC EASGIPLPSI TWLKDGWPVS LSSSVRILSG GRTLRLMQTR LEDAGQYTCV2460
 2461 VRNAAGEERK IFGLSVLVPP RIVGENTLED VKVKEKQSVT LTCEVTGNPV PEITWHKDGQ2520
 2521 LLQEDDTHHI MSGGHFLKIT NAQVSHTGRY ACLASNTAGD KSKSFSLNVL VSPTIAGVDS2580
 2581 DSGPEDVTVI LNSPTSLVCE AYSYPPATIT WFKDGTPLES NRNIRILPGG RTLQILNAQE2640
 2641 DNAGRYSCIA TNEAGEMIKH YEVKVYIPPI INKGDLLGPG LSPKEVKIKV NNTLTLECEA2700
 2701 YAIPSASLSW YKDGQPLKSD DHVNIAASGH TLQIKEAQIS DTGRYTCVAS NIAGEDELDF2760
 2761 DVNIQVPPSF QKLWEIGNML DTGRSGEAKD VIINNPISLY CETNAAPPPT LTWYKDGRPL2820
 2821 TSSDRVLILP GGRVLQIPRA KVEDAGRYTC VAVNEAGEDS LQYDVRVLLP PVIKGANSDL2880
 2881 PEEVTVLVNK STLMECLSSG SPAPRNSWQK DGQPLLEDEH HKFVSNGRIL QILNTQITDI2940
 2941 GRYVCIAENT AGSAKKYFNL NVHVPPSVIG PNPENLTVVV NNFISLTCEV SGFPPPDLSW3000
 3001 LKNEQPIKLN TNALIVPGGR TLQIIRAKVS DGGEYTCIAI NQAGESKKKV SLTVYVPPSI3060
 3061 KDHGSESLSV VNVREGTSAS LECESNAVPP PVITWYKNGQ MITESTHLEI LADGQMLHIK3120
 3121 KAEVSDTGQY VCRAINVAGR DDKNFHLNVY VPPSIEGPEN KVVVETISNP VTLTCDATGI3180
 3181 PPPMIAWLKN HKPIENSDSL EVHILSGGSK LQIARSQHSD SGNYTCIASN MEGKAQKNYI3240
 3241 LSIQVPPSIA GAEIPSEVSV LQGENVELAC NANGIPTPLI QWLRDGKPIN TSETERIRVT3300
 3301 ADGSTLTIYG ALPSNMGKYT CVATNSAGEE DRIFNLNVYV PPAIRGNKKE AEKLMALVDT3360
 3361 SINIECRATG TPPPQINWLK NGLPLPLSSH IRLLSGGQVI RIVRAQVSDV AMYTCVASNR3420
 3421 AGVDNKHYSL QVFVPPNLDN SMGTEEITIV KGSSTSMRCF TDGTPTPRMS WLKDGQPLGL3480
 3481 NTRLTISTQG MVLQLLNAET EDSGRYICIA SNEAGEVNKH FILKVLEPPH INGSEEPVEI3540
 3541 SVIVNNPLEL TCLASGIPTP KITWMKDGRP LPQTDQIQTL GGGEVLRLSS AQVEDTGRYT3600
 3601 CLASSTAGDD DKEYLVRVHA PPNIAGMDES QDFTVLRNRQ VTLECKSDAV PPPVITWLKN3660
 3661 GERLQATPRV RILSGGRYLQ VNNADLNDTA NYTCVASNIA GKTTREFILT VNVPPNIKSG3720
 3721 PQSVVIHLNM SAVLECLAEG VPAPRITWRK DGAVLSASHA RYSILENGFL HIQSAHVTDT3780
 3781 GRYLCMATNA AGTDRRRIDL QVHVPPSIAL GPTNITVTVN VQTTLACEAA GIPKPSIKWK3840
 3841 KNGHLLNVDQ NQNSYRLLSS GSLVIISPSV DDTATYECTV TNDAGEDQRT VDLTVQVPPS3900
 3901 IADEPTDLLV TKHAPTIITC TASGVPFPSI HWTKNGIRLL PREDGYRILS SGAIEIFATQ3960
 3961 LNHAGRYTCI ARNAAGSAHR HVTLYVQEPP VIQPQPSELD VIVNNPILLP CEATGTPSPF4020
 4021 ITWQKEGINV ITSGKSHAVL PNGGLQISRA VREDAGTYMC VAQNPAGTAL GKIKLNVQVP4080
 4081 PVISPHPKEY ITAVDKPISL PCEADGLPAP DITWHKDGHA IVESIRQRIL SSGALQIAFA4140
 4141 QPGDAGQYTC MAANVAGSSS MSTKLTVHVP PRIQSTDVHY TVSENSQALL PCMADGIPTP4200
 4201 VINWKKDNVL LANLLGKYTI EPYGELILEN VVLEDAGTYT CVANNAAGED THMVSLTVHV4260
 4261 LPTFTELPGD VSLNKGEQLR LSCKATGIPL PKLTWTFNNN IIPAHFDSVN GHSELVIERV4320
 4321 SKEDSGTYVC TAENSVGFVK AIGFVYVKEP PVFKGDYPSN WIEPLGGNAI LNCEVKGDPA4380
 4381 PTIQWSRKGM DIEINHRIRQ LVNGSLAIYG TVNEDAGDYT CVATNDAGVV ERSMSLTLQS4440
 4441 PPIITLEPVE TVINAGGKVI LNCQATGEPY PTITWSRQGH SIPWDDRVNV LSNNSLHIAA4500
 4501 AQKEDTSEYE CVARNLMGSV LVRVPVTVQV HGGYSQWSSW RSCSVTCGKG IQKRSRLCNN4560
 4561 PFPANGGKPC QGSDSETRNC QRKLCPVDGG WSEWNPWEEC TRSCGRGNRT RTRTCNNPSA4620
 4621 QYGGRPCEGN AVEIVMCNIR PCPVHGVWST WQPWSACSES CGKGAQIRTR LCNNPPPSFD4680
 4681 GSYCDGAETQ MQVCNERHCP VDGKWATWTS WSSCSVSCGG GARQRTRECS DPVPQYGGSR4740
 4741 CEGSDVQSDF CNNDPCPTHG NWSPWSGWGM CSRTCNGGQM RRYRTCDNPH PSNGGRACGG4800
 4801 PDSQIQRCNT DMCPVDGSWG NWHSWGQCSA SCGGGEKTRK RLCNNPVPSI SGRPCPGDAT4860
 4861 QVSRCNMQVC PGGPQRARGS VIGNINDVEF GIAFLNATVT DSPASDTRII HAKITNVPRS4920
 4921 LGPAMRKIVS ILNPIYWTAA KEIGEAVNGF TLTNAVFKRE TQVEFATGEI LRMTHIARGL4980
 4981 DSDGALLLDI VVSGYVLQLQ SPAEVTVKDY TEDYIQTGPG QLYAYSTRLF TIDGVSVPYT5040
 5041 WNHTVFYDDA QGRMPFLVET LHASSVESDY NQLEETLGFK IHASISKGDR SNQCPSGFAL5100
 5101 DSIGPFCADE DECAAGSPCS QICHNTVGTY YCSCPEGLTI AADGKTCQDI DECALGGHTC5160
 5161 HAGQDCDNTI GSYRCVVHCG IGFRRTSDGL SCQDINECQE SSPCHHRCFN AIGSFHCGCE5220
 5221 PGYQLKGRKC IDVNECRQNV CRPDQHCKNT RGGYKCIDLC PNGMTKAENG TCIDIDECKD5280
 5281 GTHQCRYNQI CENTRGSYRC VCPRGFRSQG VGRPCMDINE CEQVPKPCAY QCSNTPGSFK5340
 5341 CICPPGQHLL GDGKSCAGLE RLPNYGSQHN SYNLAWFSPV RNSYQPQQHY RQYSHLYSSY5400
 5401 SEYRNSRTSL SRTRRTIRKT CPEGSEASRD TCVDIDECEN RDICQHECKN TFGSYHCICP5460
 5461 PGYQLMLNGK TCQDVDECLE QSVRCGPNRM CFNMRGSYQC IDTPCPPNYQ RDPVSGFCLK5520
 5521 NCPPNDLECA LSPYALEYKL VSLPFGIAAN QDLIRLVAYT QDGVMHPRTT FLMVDEEQNV5580
 5581 PFALRDENLK GVVYTTRPLR EPDTYRMRVR AASYSANGTI EYQTTFIVYI AVSAYPY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle