YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73960888
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLSALLALA SKVTLPRDYR YGMSRPGSLA DRRKNPPGTR RRRVAVEPIS DEDWHLFCGD  60
   61 TVEILEGKDA GKQGKVVQVI RQRNWVVLEG LNTHYRYVGK TAESRGTMIP SEAPLLHHQV 120
  121 KLVDPVDRKP TEVEWRFTEA GERVRVSSRS GRIIPKPDFP RADGIVPETW TDGPKDTSVE 180
  181 DALERTYVPR LKTLEEEVME AMGIQETRRH KKVYWY

Type	Start	End	Confidence
Signal Peptide	1	16	0.83
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	216	0.99