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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73960713
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.44
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLDCSDYVLD SRMNNPSETS KPSMESGDGN TGTQTNGLDF QKQPVPVGGA ISTAQAQAFL  60
   61 GHLHQVQLAG TSLQAAAQSL NVQSKSNEES GESQQPSQPS QQPSVQAAIP QTQLMLAGGQ 120
  121 ITGLTLTPAQ QQLLLQQAQA QAQLLAAAVQ QHSASQQHSA AGATISASAA TPMTQIPLSQ 180
  181 PIQIAQDLQQ LQQLQQQNLN LQQFVLVHPT TNLQPAQFII SQTPQGQQGL LQAQNLLTQL 240
  241 PQQSQANLLQ SQPSITLTSQ PATPTRTIAA TPIQTLPQSQ STPKRIDTPS LEEPSDLEEL 300
  301 EQFAKTFKQR RIKLGFTQGD VGLAMGKLYG NDFSQTTISR FEALNLSFKN MCKLKPLLEK 360
  361 WLNDADYSLS SPSALNSPGL GMEGLNRRRK KRTSIETNIR VALEKSFLEN QKPTSEEITM 420
  421 IADQLSMEKE VIRVWFCNRR QKEKRINPPS SGGTSSSPIK AIFPSPTSLV ATTPSLVPSS 480
  481 AATTLTVNPV LPLTSAAVTN LSVTGTTDST SSNTATVIST APPASSAVTS PSLSPSPSAS 540
  541 ASTSEASSAS ETSTTQTTST LSSPLGTSQV MVTASGLQTA AAAALQGAAP LPANASLAAM 600
  601 AAAAGLSPGL MAPSQFAAGG ALLSLNPGTL GGALSPALMS NSTLATIQAL ASGGSLPITS 660
  661 LDATGNLVFA NAGGAPNIVT APLFLNPQNL SLLTSNPVSL VSAAAASAGN SGPVASLHAT 720
  721 STSAESIQNS LFTVASAGGA ASTTTTASKA Q

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle