YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73959129
Protein type:	Transmembrane
Type Confidence:	0.74
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVPGSYQAA AGPSSVPTAP PSYEETVAVN SYFPMPPAPA PGPTTGLVTG PDGKGMNPPA  60
   61 YYTQPVPVPN ANAIAVQTVY VQQPISFFDR PIQMCCPSCN KMIVTQLSYN AGALTWLSCG 120
  121 SLCLLGCIAG CCFIPFCVDA LQDVDHYCPN CKALLGTYKR L

Type	Start	End	Confidence
Cytoplasmic	1	112	0.64
Transmembrane Helix	113	137	0.66
Non-Cytoplasmic	138	161	0.89