YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73959059
Protein type:	Globular with Signal Peptide
Type Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLGALSSSL RSFPVTRAQK PGPQHLAKCY TAEPSGCNRR PHPSRAQNSS YLALFREKFA  60
   61 EPWLGRATLL EEGLGGERLA QRGFCMNGGP ENGRREKRIA LKGTGDTRCS ECQTVRHTGT 120
  121 SLPGAAPARL IDRPVPVLLV GSVELLTHHL LPRFRLMKER ARLLRGQSVQ QVGPQGLLYV 180
  181 QQRELAVTSP KDGSISILGS DDATTCHIVV LRHTGNGATC LTHCDGTDTK AEVPLIMSSI 240
  241 KSFSDHAQGG RLEVHLVGGF SDDRQLSQKL THQLLSEFDR QEEDIHLVTL CVTELNDREE 300
  301 NENHFPIIYG IAVNIKTAEI YRASFPDRGP EEELRAARAL TGGPMISIYD AETEQLRIGP 360
  361 YSWMPFPHVD FWLQQDDQQI LENLSTSPLA EPPHFVQHIR STLMFLKKHP SPTSALFPGN 420
  421 KALLYKKNEG GLWEKISCPG S

Type	Start	End	Confidence
Signal Peptide	1	18	0.79
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	441	0.99