YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73958785
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEGDNRSTN LLAAETASLE EQLQGWGEVM LMADKVLRWE RAWFPPAIMG VVSLLFLTIY  60
   61 YLDPSVLSGV SCFVMFLCLA DYLVPILAPR IFGSNKWTTE QQQRFHEICS NLVKTRRRAV 120
  121 GWWKRLFTLK EEKPKMYFMT MIVSLAAVAW VGQQVHNLLL TYLIVTFLLL LPGLNQHGII 180
  181 LKYIGMAKRE INKLLKQKEK KNE

Type	Start	End	Confidence
Cytoplasmic	1	41	0.98
Transmembrane Helix	42	61	0.95
Non-Cytoplasmic	62	66	0.79
Transmembrane Helix	67	88	0.89
Cytoplasmic	89	133	0.96
Transmembrane Helix	134	153	0.91
Non-Cytoplasmic	154	158	0.81
Transmembrane Helix	159	181	0.89
Cytoplasmic	182	203	0.93