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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73958129
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIHKCILAL FLVTDVFSTE LAKAIKPIDR KSVHQICSGQ VVLSLSTAVK ELVENSVDAG  60
   61 ATNIDLKLKD YGVDFIEVSD NGCGVKEENF EGLTLKHHTS KIQDFADLTQ VETFGFRGEA 120
  121 LSSLCALSDV TISTCHTSAK VGTRLAFDHN GKIVQKTPHP RPRGTTVSVQ QLFYTLPVRH 180
  181 KEFQRNIKKE YAKMVQVLHA YCIISVGIRI SCSNQVGQGR RQLVVCTSGS SSVKENIGSV 240
  241 FGQKQLQSLI PFVQLPPSDS VCEEYGLNRA DVLHSRFHIS GFISHCAHGV GRSSTDRQFF 300
  301 FINRRPCDPA KVSRLVNEVY HMYNRHQYPF IVLNISVDSE CIDINVTPDK RQILLQEEKL 360
  361 LLAVLKTSLI AMFDSNVNKL TVSQQPLLDI EGHVIKTHQA EMDKPLAEKQ DSPALFRTEG 420
  421 EEKRAVTISR LRENFSLRHT TENRSRGPQT PESRQISPRQ KRHIQLPGAL HSPCTPRPVP 480
  481 DTNSCGPQEV VRHLDEGPCG RSNRVDIEQE SGPSHLSGGL GEGLSAPEAG SHSGGVSAAC 540
  541 APEDTLSQGS AESPEIDHHP ADAGGQLDHE NSGQTCRISP QPADMSFSNT KRFKKDGAPL 600
  601 NSDAHPGLVK TRNTPASQVD VAVKINKKVV PLAFSMRSLA KQIKQLRQQG QQREGEQNCR 660
  661 KFRAKICPGE NQAAEDELRK EISKTMFAEM EIIGQFNLGF IITKLKADIF IVDQHATDEK 720
  721 YNFEMLQQHT VLQGQRLIAP QTLNLTAVNE AILIENLEIF RKNGFDFVID EGAPVTERAK 780
  781 LISLPTSKNW TFGPQDIDEL IFMLSDSPGV MCRPSRVRQM FASRACRKSV MIGTALNTSE 840
  841 MKKLITHMGE MDHPWNCPHG RPTMRHIANL DVISQN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle