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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73957832
Protein type: Transmembrane
Type Confidence: 0.59
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDSDDEYDR RRRDKFRRER SDYDRSRERD ERRRGDDWND RMTSFIFLLL LILIAREWDR  60
   61 GRERRSRGEY RDYDRNRRER FSPPRHELSP PQKRMRRDWD EHSSDPYHSG YEMPYAGGGG 120
  121 GPTYGPPQPW GHPDVHIMQH HVLPIQARLG SIAEIDLGVP PPVMKTFKEF LLSLDDSVDE 180
  181 TEAVKRYNDY KLDFRRQQMQ DFFLAHKDEE WFRSKYHPDE VGKRRQEARG ALQNRLRVFL 240
  241 SLMESGWFDN LLLDIDKADA IVKMLDAAVI KMEGGTENDL RILEQEEEEE QAGKPGEPSK 300
  301 KEEGRAGPGL GDGERKANDK DDKKEDGKQA ENDSSNDDKT KKSEGDGDKE EKKDDSEKDA 360
  361 KKTSKKRNRK HSGDDSFDEG SVSESESESE SGQAEEEKEE SEEALKEKEK PKEEDREKPK 420
  421 DTPGLECKPR PLHKTCSLFM RNIAPNISRA EIISLCKRYP GFMRVALSEP QPERRFFRRG 480
  481 WVTFDRSVNI KEICWNLQNI RLRECELSPG VNRDLTRRVR NINGITQHKQ IVRNDIKLAA 540
  541 KLIHTLDDRT QLWASEPGTP PLPTSLPSQN PILKNITDYL IEEVSAEEEE LLGSSGGAPP 600
  601 EEPPKEGNPA EINVERDEKL IKVLDKLLLY LRIVHSLDYY NTCEYPNEDE MPNRCGIIHV 660
  661 RGPMPPNRIS HGEVLEWQKT FEEKLTPLLS VRESLSEEEA QKMGRKDPEQ EVEKFVTSNT 720
  721 QELGKDKWLC PLSGKKFKGP EFVRKHIFNK HAEKIEEVKK EVAFFNNFLT DAKRPALPEI 780
  781 KPAQPPGPAQ SLTPGLPYPH QTPQGLMPYG QPRPPILGYG VPTGGPPYPH APYGAGRGNY 840
  841 DAFRGQGYPG KPRNRMVRGD PRAIVEYRDL DAPDDVDFF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle