YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73957625
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPFSDTWDF SSPVISLWIN RFYIYLGFAF GISLWICFQI VIRKQLFILK GKKSQEKSVP  60
   61 KATGDLMTNG CISLQNKEVF VSGVKIFYGS QTGTAKGFAT SLAEAVTSLD LPVAVINLKE 120
  121 YDPDDQLVEE VTSKNVCAFV VATYTDGQPT ESAVWFCKWL EEASSDFRFG KTYLKGMRYA 180
  181 VFGLGNSVYA SHFNKVGKNV DKWLWMLGAH RVVARGEGDC DVVKSKHGSI EADFRVWKTK 240
  241 FLARLQALQK GEKKPCDGNC KRGQCESSVE EEPSESTSEE ESGTEDHQNL NSVVDVEDLG 300
  301 KIMNCVKKEK REKEEQEEKS SLVRNTVKNE DSERRTMITP ALREALTKQG YQLIGSHSGV 360
  361 KLCRWTKSML RGRGGCYKHT FYGIESHRCM ETTPSLACAN KCVFCWRHHT NPVGTEWRWK 420
  421 MDQPEMILKE AIENHQNMIK QFKGVPGVKE ERFEEAMMVK HCALSLVGEP IMYPEINRFL 480
  481 KLLHECKISS FLVTNAQFPL EIRNLKPVTQ LYVSVDASTK DSLKKIDRPL FKDFWQRFLN 540
  541 SLKALAAKQQ RTVYRLTLVK AWNVDELQAY AELVSLGNPD FIEVKGVTYC GESSASSLTM 600
  601 ANVPWHEEVI HFVRELVDLI PDYEIACEHE HSNCLLIAHK RFKIGREWWT WIDYNRFQEL 660
  661 VQGYEDSGGS ATFSAEDYMA KTPHWALFGA SERGFDPKDT RYQRKNKSKD ISGC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle