YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57087439
Protein type:	Globular with Signal Peptide
Type Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAARVVQACG AAWAGGVLRR AAPCSLQPAL RRLTSSNNRP REDSWLKSLF VRKVDPRKDA  60
   61 HSNLLAKKET SSLYKLQFHN VKPECLEAYN KICQEVLPKI HEDKHYPCTL VGTWNTWYGE 120
  121 QDQAVHLWRY EGGYPALTEV MNKLRENQEF VEFRKARSNM LLSRKNQLLL EFSFWNEPIP 180
  181 RSGPNIYELR SYQLRPGTMI EWGNYWARAI RFRQDGNEAV GGFFSQIGQL YMVHHLWAYK 240
  241 DLQSREDIRN AAWHKHGWEE LVYYTVPLIQ EMESRIMIPL KTSPLQ

Type	Start	End	Confidence
Signal Peptide	1	21	0.84
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	286	0.99