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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73957549
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADKGKKGKA AAPAPDQDQK EEPKKKEKSV QPKDEVGTRK GCRRYKWELK DSNREFWVMG  60
   61 HAEVKILSLS CLIASMIMFT GTTVHPLLTL IITMELSVFC FFFITYTFAI NRYMPFILWP 120
  121 ISDLLNDLFA FIFLVGAVII AVKSRQTMPM HYFIAVILIG VAGLFALIDI CLQRKHFKGK 180
  181 RIKRNVLTPP PPGKDQKGLS FITFVCYVAS SASAFLAAPL LEFLLALYFL FADAMQLNDK 240
  241 WQGLCWPMMR GPSESQPGAG DRVFNVFLIK KGALHVGEAT EQAAAWPTSC CPPDRARPLG 300
  301 PGTGQPPGAP GQGQERVEKG QGVRWDQDRP GARGMPELRV RGVPSLPGSS SPGNGGSSPV 360
  361 PATCCPSEAL ALSGLRCAPV QGAQGSDHTP PPQDFLRCVT AALIYFAISI TAVAKYSDAA 420
  421 SKAAGVFGFF ATIVFAVDFY LIFNDVAKFL KEGDSTEENT ADKAEGFGVR ICHADTPRGE 480
  481 QPRETWERLE QGHVGTLRVA KRIPTLTPTE GRRREAGPSA VGAAGRLVTG TRRATKRGTR 540
  541 GVVHVGPCVL VSATDLKPLY VSENPQPQAA RSRPAAQSGP VRRASPPLRF SGRALVPPRH 600
  601 PERLPHGSTR SSHNPVSRPR KLTEGSQSTA PLRQPEPGAL VVGRWSHGGL GLEAREDAGA 660
  661 PCKRPRRSAP TLVHIRKPAG QRSVQRRGRQ HKENASVATL ALDSPPRVLT TTLPCICLTR 720
  721 IRELENGPGR CWLVGNKRQP SHLAAVLPSR PKRTAALPSP ITSRPSKQLH QHAGCQTLSI 780
  781 SRGVPGLCCC CDAPGLEDEE QGKVQAARRH VALGLAGGLP SDRC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle