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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73957458
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALFGIKAAR FHVEGCSRSQ SAARGAGPRG SPGGRTRPRS VASGAAGTCD SRKSCRLAPP  60
   61 RAASRRLAPG SRPPPAMGPR YGGAPALLLP LLLLLQVSSG LCQEPEPCRP GFGADSYTFT 120
  121 VPRRHLERGR VLGRVSFEGC TGLPRTAYVS DDTRFKVGTD GVITVKRPLQ LHKPEISFLV 180
  181 HAWDSSRRKL STRVRLKAAT HHHHHHHDAP SKTQTEVLTF PSSQHGLRRQ KRDWVIPPIS 240
  241 CPENEKGPFP KNLVQIKSNR DKEIKVFYSI TGQGADAPPV GVFIIERETG WLKVTEPLDR 300
  301 EQIAKYILYS HAVSSNGNAV EDPMEIVITV TDQNDNKPEF TQAVFQGSVT EGALPGTSVM 360
  361 QVTATDADDD VNTYNAAIAY SILTQDPLLP SSMMFTINKD TGVISVLTTG LDREGVPMYT 420
  421 LVVQAADLQG EGLTTTATAV ITVTDINDNP PIFNPTTYQG RVPENKANVE IAVLKVTDAD 480
  481 VPDTPAWRAV YTILNNNNDQ FVVTTDPVTN DGILKTTKGL DFEDKQQYVL YVTVVNVTPF 540
  541 EVILSTSTAT VTVDVEDVNE APIFIPCPKV VSIPEDFGVG QEITSYTAED PDTYMEQRIT 600
  601 YRIWRDAAGW LEVNPESGAI FTRAELDRED FEHVKNSTYE ALIIAIDNGS PVATGTGTLL 660
  661 LVLSDVNDNG PIPEPRNMDF CQKNPQPHVI NIIDPDLPPN TSPFTAELTH GASVNWTIEY 720
  721 NDPGGNWTRE SLILKPKKTL ELGDYKINLK LTDNQNKDQV TTLDVFVCDC EGVVNSCKRT 780
  781 APYAEAGLQV PAILGILGGI LALLILILLL LLFVRRRRVV KEPLLPPEDD TRDNVYYYDE 840
  841 EGGGEEDQDF DLSQLHRGLD ARPEVTRNDV APTLLSVPQY RPRPANPDEI GNFIDENLKA 900
  901 ADTDPTAPPY DSLLVFDYEG SGSEAASLSS LNSSESDQDQ DYDYLNEWGN RFKKLADMYG 960
  961 GGEDD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle