YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73957241
Protein type:	Globular with Signal Peptide
Type Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGPPGSPWQW GLLLLLLPPA TPFWLFNVLF PPHTTPKAEL SNHTRPVILV PGCLGNQLEA  60
   61 KLDKPDVVNW MCYRKTEEFF TIWLDLNMFL PLGVDCWIDN TRVVYNRSSG RVSNAPGVEI 120
  121 RVPGFGKTYS VEYLDNNKLA GYMHTLVQNL VNNGYVRDET VRAAPYDWRL EPSQQEEYYR 180
  181 KLAGLVEEMH AAYGKPVFLI GHSLGCLHLL YFLLRQPQAW KDHFIDGFIS LGAPWGGSIK 240
  241 PMLVLASGDN QGIPIMSSIK LREEQRITTT SPWMFPSREA WPEDHVFIST PSFNYTGRDF 300
  301 QRFFADLHFE EGWYMWLQSR DLLAGLPAPG VEVYCLYGVG LPTPRTYIFD HGFPYTDPVG 360
  361 VLYEDGDDTV ATRSTELCAR WQSRQPQPVH LLPLHGTEHL NMVFSNQTLE HINAILLGTY 420
  421 RHNTPVPPAA SPGPLPPE

Type	Start	End	Confidence
Signal Peptide	1	22	0.77
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	438	0.90