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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73956886
Protein type: Globular with Signal Peptide
Type Confidence: 0.45
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENKRGGLGT IRVGLGAQLV GPCLGPSTQA GRERVSVPAT LTWDKAAVRP LTFRLTPGDS  60
   61 SDGQGGAGQY RKAAREEGGA TDGEAASPHP GSHRGQGGGG RHSYTMAGPT CFLLFLSATQ 120
  121 LFSQRMPFSE GAPKTPQKLG LGVKDLHGNE TLQQGAHTGY QMEVLTFPHA RFGLKRQKRD 180
  181 WVVPPLSIPE NERGPFPKMV AQVKSNKNKE IQVFYSITGT GADEPPYGVF IMDRETGWLK 240
  241 VTKPLDREKK SHYVLFLHAV SSTGNAVEDT LEIVITVTDQ NDNRPEFTQA VFEGSVMERA 300
  301 HPGTSVLQIT ATDVDDHENT YNAAIVYTIL SQDPLVPHSN MFAINRQTGV ISVLDPGLDQ 360
  361 QSAPAYTLTV QAADLQGEGL SCRAKAVITV TQSNPNPPVF SPTSYTGHVF ENKVDAGIVR 420
  421 LYVKDADAAG SPAWKAVFSI LNDRGGLFTI TTDPETNDGL LKTAKGLDFE TTQQYTLYVT 480
  481 VVNEVPLASL STSTATVTVD VVDVNEAPVF VPPTKMVEMP KDVGVGQEIT SYRAQDPDSF 540
  541 QSQKIRYQIW HDPSHRLDIN SETGVISTRA SMQMEDMKTQ TFSAVVIATD NGQPPATGTG 600
  601 TLLLTFSHID CPGVDSHCLD ICQRGPESQD GGGMEQISSP LTTHVLDTAS GLPAQGLCLR 660
  661 LSRLEDHGQQ WTELKKSYTD SDGRCPGLLP PGPMKAGTYK LSFDTEGYWK KKGQESFYPY 720
  721 VEVVFTIANE THRFHVPLLL SPWSYTTYRG S

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle