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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73956460
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPPPLERDP RQQRGVSLLV RYFMIPCNVC LILLATSTLG FAVLLFLNNY KPGTHFTPAP  60
   61 PTPPDACRGM LCGFGAVCEP SAGGSGRASC VCKKSACPAV VAPVCGSDAS TYSNECELQR 120
  121 AQCSQQRRIR LLSRGPCGSR DPCSNVTCSF GSTCVRSADG QTATCLCPAT CRGPPEGPVC 180
  181 GSDGADYPSE CQLLRLACTR QENIVKKFDG PCDPCQGTHH DLSRVCRVHP RTRHPEMLLR 240
  241 PESCPSQPAP VCGDDGVTYD NDCIMGRTGA TRGLVLQKVR SGQCQPQDQC PDVCRFNAVC 300
  301 LSRRGRPRCS CDRVICDGAY RPVCAHDGHT YDNDCWRQQA ECRQQRTIPA KHQGPCDQPL 360
  361 SPCLGVRCPF GATCAVKNGE AECVCQQVCS GIYDPVCGSD GVTYGSTCEL EATACALGRE 420
  421 IRVARRGPCD RCGQCRFGAL CEAETGRCVC PSECVASAQP VCGSDGHTYA SECELHVHAC 480
  481 THQISLHVVS AGHCQTCGDT VCAFGAVCLA GQCVCPRCER PPPGPVCGSD GVTYDSACHL 540
  541 REAACQQQTQ IEEARAGPCE QAECGSGGSG SGEDGECEQE LCQQHGGVWD EDSEDGPCVC 600
  601 DFSCHSVLRS PVCGSDGLTY GTECELKKAR CESRRELYVT AQGACRGPTL APLLPAVPPH 660
  661 CTQTPYGCCQ DNVTAARGVG LAGCPSSCQC NPHGSYSGTC DPTTGQCSCR PGVGGLKCDR 720
  721 CEPGFWNFRG IVTDGRSGCT PCSCDPRGAV RDDCEQMTGL CSCKPGVAGP KCGQCPDGHA 780
  781 LGPGGCETDS LAPETCAEMH CEFGASCVEE AGSARCVCPT STCPGASATK VCGSDGVTYG 840
  841 NECQLRTIAC RQGLDISIQS LGPCQETVAP GARPTSVPRA TSGLSTSKAL PPAPSTLPLA 900
  901 PSSTPHSRPT PRPSPGSRTT ASIPRTVTRP VLTMPPTAPA TAANLATSAF GESGSADGSG 960
  961 DEGLSGDLEA SGTGSGGLEP PEGGSAVTPE PPMERASCYN SPLGCCSDGK TPSLDAEGSN1020
 1021 CPATKAFQGV LELEGVEGQE LFYTPEMADP KSELFGETAR SIESTLDDLF RNSEVKKDFR1080
 1081 SVRLRDLGPG SSVRAIVDVH FDPATTFRAP DVGQALLRQI QASRRRSLGV RRPLQEHVRF1140
 1141 MDFDWFPAFF TGATTGATPA AATARATTVA HLPPAGTQWA LYPSHTSRPV GRTTAPPTTR1200
 1201 QPPTTAPRRV PGRRPLPPGT QQPPKPCDSQ PCLHGGTCQD QDSGGGFTCS CPVGRRGAVC1260
 1261 EKALYLSVPA FNGRSFLAFP TLRAYHTLRL ALEFRALEPQ GLLLYNGNAQ GKDFLALTLL1320
 1321 GGRVQLRFDT GSGPAVLTSS VPIEPGRWHR LELSRHWRRG TLSVDGEPLV LGHSPSGTDG1380
 1381 LNLDTDLFVG GIPEDQASVV LERTSISVGL KGCIRLLDVN NQRLELSSWP GAAARSSGVG1440
 1441 ECGDHPCLPN PCLDGAPCQA LEAGMFHCQC PPGRFGPTCS GDKNPCEPNP CHGAAPCRVL1500
 1501 PDGEAKCECP RGRGGAICQT VSERDSSQPF LADFHGFSYL ELKGLHTFER DLGEKLALEV1560
 1561 VFLARGPSGL LLYNGQKTDG KGDFVSLALH DRFLEFRYDL GKGAAVIRSK EPVALDTWTR1620
 1621 VSLERNGRKG AMRVSDGPRV LGESPKSRKV PHTVLNLKEP LYVGGAPDFS KLARAAAVFS1680
 1681 GFDGAIQLVS LKGHQLLSQE HVVRSVDVSS FAHHPCTQAS GHPCLNGASC LPREASYECL1740
 1741 CPGGFSGLHC EKGLIEKSAG DVDALAFDGQ TYVEYLNAVT ESELTNEIPA PDAPDSGALP1800
 1801 SEKALQSNHF ELSLRTEATQ GLVLWSGKAT ERADYVALAI VDGRLQLTYD LGSQPVVLRS1860
 1861 TVPVNTNRWL RVRAHREQRE GSLQVGNEAP VTGSSPLGAT QLDTDGTLWL GGLEKLPIGQ1920
 1921 ALPKAYGTGF VGCLRDVVVG QRPLHLLEDA VTKPELRPCA AP

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