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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73956285
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGSPWLPLD RGWGGSIVVG EVAAMLVQVG DDGDSGSDSG RRGAAPRRAG PGASQGPLSP  60
   61 GMTSAGRANP YSIVSSEEDG LHLVTMSGAN GFGNGKVHTR RRCRNRFVKK NGQCNIEFAN 120
  121 MDEKSQRYLA DMFTTCVDIR WRYMLLIFSL AFLASWLLFG IIFWVIAVAH GDLEPAEGRG 180
  181 RTPCVMQVHG FMAAFLFSIE TQTTIGYGLR CVTEECPVAV FMVVAQSIVG CIIDSFMIGA 240
  241 IMAKMARPKK RAQTLLFSHN AVVALRDGKL CLMWRVGNLR KSHIVEAHVR AQLIKPRVTE 300
  301 EGEYIPLDQI DIDVGFDKGL DRIFLVSPIT ILHEIDEASP LFGISRQDLE TDDFEIVVIL 360
  361 EGMVEATAMT TQARSSYLAN EILWGHRFEP VLFEEKNQYK IDYSHFHKTY EVPSTPRCSA 420
  421 KDLVENKFLL PSANSFCYEN ELAFLSRDEE DEADGGQDGR SPQARHDFDR PQASAAALQT 480
  481 GVRDLSHHGP RKFNNLNREV WLLEPAKVAW VPSSLRHGTA YVGKGPCWQR VCECECVNTQ 540
  541 VLLRPSFDPD ITALMALDPS AAYQRPLEG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle