YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57086435
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRGRSVPGR TQGGAIAHFG RAARRLTSAR GLTRSVGKAG TRAPRPTSSA AAASSGPGCG  60
   61 DREEPNVGSF WWAKRTQPRN VISASAVFPP ELGCAAAFLL RRRSASEARM EAAGLLCLAA 120
  121 AALLAWGFLR VWDSRERTKS QEQAGVLGDG SRTLLVIAHP DDEAMFFAPT VLGLARLGHR 180
  181 LSLLCFSAGN FYNQGEIRKK ELLQSCDVLG IPPSSIMIID NRDFPDDPSV RWDTERVASI 240
  241 LLQHIEMNSI NLVVTFDEGG VSGHSNHIAL YAAMRTLHSE GRLPKGCSVL TLQSVNVLRK 300
  301 YISLLDLPFT LLRRQDVLFV LTSKEVAQAK RAMSCHHSQL LWFRRLYVLF SRYMRINSLY 360
  361 FL

Type	Start	End	Confidence
Cytoplasmic	1	109	0.79
Transmembrane Helix	110	132	0.87
Non-Cytoplasmic	133	362	0.73