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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73956050
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.38
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDEPPFSDAA LEQALAEPCE LDAALLTDIE DMLQLINNQD SDFPGLFDPP YAGGGAGGTD  60
   61 PASPDASSPG SLSPSPATMS SPLDGFLGGP KATPPPSSPP QPAPTSLKMY PPGPAFSPGP 120
  121 GIKEEPLPLT ILQPPTPQPL PGSLLPQSFP APAPPQFSSA PALGYPGPTG GFSTGTPPGS 180
  181 TPQPLPGLPL ASLPGVPPVS LHTQVQNAAP QPLLTATANP TAAPGTTTVT SQIQQVPVLL 240
  241 QPHFIKADSL LLTTMKTDMA TTVKAAGISS LAPGTTVQTG PLQTLVSGGT ILATVPLVVD 300
  301 TEKLPINRLA AGGKALGSAQ NRGEKRTAHN AIEKRYRSSI NDKIVELKDL VVGTEAKLNK 360
  361 SAVLRKAIDY IRFLQQSNQK LKQENLSLRA AAHKSKSLKD LVSVCGGGGN TDVPMESGKP 420
  421 EVVDTLSPPP SDAGSPSQSS PLSLGGKSGG SAGSGSDSEP DSPVFEDSQV KPEQLLSPHS 480
  481 RGMLDRSRLA LCTLVFLCLS CNPLASLLGS WGSPSPSDAG STYHGPGRNV LGTEGRDGPG 540
  541 WTPWLLPPLI WLTNGLLVLA SLALLFIYGE PVTRPHSGPA VHFWRHRKQA DLDLARGDFP 600
  601 QAAQQLWLAL RALGRPLPTS HLDLACSLLW NLIRHLLQRL WVGRWLAGRA GGLHRDCALQ 660
  661 ADARTSARDA ALVYHKLHQL HTMGKYTGGH LTAANLALSA LNLAECAGDA VSVATLAEIY 720
  721 VAAALRVKTS LPRALHFLTR FFLSSARQAC LAQSGSVPLA MQWLCHPVGH RFFVDGDWAV 780
  781 CSAPRESLYS LAGNPVDPLA QVTQLFREHL LERALNCVAQ PSPSPGSADG DREFSDALGY 840
  841 LQLLNSCSDA AGAPACSFSI SSSMATTTGT DPMAKWWASL TTMVIHWLRR DEEAAERLYP 900
  901 LVEHLPRALQ ESERPLPRAA LHSFKAARAL LGRGKAESGP ASLAICEKAS GYLQDSLATT 960
  961 PAGSSIDKAM QLLLCDLLLV ARTSLWRRQQ PPAPTQASQG PGAGAQASAL ELRGFQRDLS1020
 1021 GLRRLAQSFR PAMRRVFLHE ATARLMAGAS PTRTHQLLDR SLRRRAGPCG KGARGQGAVA1080
 1081 ELEPRPTRRE HAEALLLASC YLPPGFLSAP GQRVGMLAEA ARTLEKLGDR RLLHDCQQML1140
 1141 MRLGGGTTVT SS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle