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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73956024
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MACVLADGQG EILAPPKFEF SSTHHRSLYL GVEHPFKEEF AAGSLSVLAP NLPCILCLVV  60
   61 LELEAGKPTL LQAHGLALPI TRFGGLKQVG RSEVKRALEG GPCTRAPHQP PHAPATSRDA 120
  121 PLLRPRDPEF SRRGAKTGEP PRIGLEAGGT VPWTSIPNLT ETEARGGRAP AVTPRTRSPR 180
  181 SRHRTPGSLG TQRRRSPEPA ASFPGRLGHT VLLASSRRNL RPPTSSSAPR LPPGAQHSPP 240
  241 LSFPSASRPP EVTHRKRPGS HGGGGRRWRR PAAGEERGHG DPWERPDSRV MAASPHTLSS 300
  301 RLLTGTAPVL GHGFEKILIL LPRATPWFRL AATLGALGEV CLVFGEKHNL CELCLPLFSI 360
  361 TGCAWYLERR AVQEAPHTFM HLFRSINRRW ITFQHFTFLK RMYVTQLNRS LNQQVKRKPE 420
  421 PVALPFLEKT SLGQAKAEIC EMRPLPPPSL PLSRKPNEKE LLELESASII EGSLDAGKET 480
  481 KDEKHWKEMK LHLDDLPGIL ARLSKIKLTA LVVSTTSAGF ALAPGPFDWP CFLLTSLGTG 540
  541 LASCAANSIN QFFEVPFDSN MNRTKNRPLV RGQISPLLAV SFATCCAVPG VALLTWGVNP 600
  601 LTGALGVFNI FLYTCCYTPL KRISIANTWV GAVVGAVPPV MGWTAATGSL DAGAFLLGGI 660
  661 LYSWQFPHFN ALSWGLREDY SRGGYCMMSV THPALCRRVA LRHCLALIGL STAAPVLDVT 720
  721 TWTFPVISLP INLYITYLGF RFYTDADRKS SRKLFFCSLW HLPLLLLLML TCKRPPGARG 780
  781 AGAEPQS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle