YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73955992
Protein type:	Globular with Signal Peptide
Type Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPPGPAGAP ATSAEPLSRS IFRRFLLMLC SLLTSLYVFY CLAERCQSLA GPLVRPSGGG  60
   61 GGGGGGGAGA PGRGALAGGP GEPAGWPAAA HGKRLLQLQR WRRRRPAVPR DDGEEAAWDG 120
  121 EPPGLAGGPG GSGAGSSAAE APPGTLALLL DEGSKRLPQA IIIGVKKGGT RALLEFLRVH 180
  181 PDVRAVGAEP HFFDRSYDKG LAWYRDLMPR TLDGQITMEK TPSYFVTREA PARISAMSKD 240
  241 TKLIVVVRDP VTRAISDYTQ TLSKRPDIPT FESLTFKNRS TGLIDTSWSA IQIGIYAKHL 300
  301 EHWLRHFPLG QMLFVSGERL ISDPAGELGR VQDFLGLKRI ITDKHFYFNK TKGFPCLKKA 360
  361 EGSSKPHCLG KTKGRTHPDI DRDVVRRLRD FYRPFNLKFY QMTGQDFGWD G

Type	Start	End	Confidence
Signal Peptide	1	43	0.75
N-region	1	34
H-region	35	40
C-region	41	43
Cleavage Site	43	44
Non-Cytoplasmic	44	411	0.97