YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73955677
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVCPDRLQTL EPVASAQAEA SRCVGDAPWF AGFAGAGGRY GGLTGTLEAG ASASRSQREP  60
   61 PPPPPPPPPP PPPPPPPPPS RPPAAPAMSA TAATAPPAAP AGEGGPPAPP PNLTSNRRLQ 120
  121 QTQAQVDEVV DIMRVNVDKV LERDQKLSEL DDRADALQAG ASQFETSAAK LKRKYWWKNL 180
  181 KMMIILGVIC AIILIIIIVY FSS

Type	Start	End	Confidence
Cytoplasmic	1	179	0.98
Transmembrane Helix	180	201	0.93
Non-Cytoplasmic	202	203	0.86