YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68446712, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Non-Cytoplasmic	1	4	0.91
Transmembrane Helix	5	24	0.91
Cytoplasmic	25	41	0.90
Transmembrane Helix	42	65	0.90
Non-Cytoplasmic	66	73	0.83
Transmembrane Helix	74	97	0.89
Cytoplasmic	98	105	0.80
Transmembrane Helix	106	128	0.88
Non-Cytoplasmic	129	149	0.88
Transmembrane Helix	150	169	0.95
Cytoplasmic	170	199	0.95
Transmembrane Helix	200	221	0.92
Non-Cytoplasmic	222	248	0.95
Transmembrane Helix	249	268	0.95
Cytoplasmic	269	287	0.91
Transmembrane Helix	288	310	0.91
Non-Cytoplasmic	311	319	0.81
Transmembrane Helix	320	340	0.95
Cytoplasmic	341	365	0.99

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIWMIISGLI VGILLGFVMQ RTRFCLAGGF RDMYVQKNNK MFYALLVAIT VQSIGLLILT  60
   61 GLNVISIPDS TFPIIGTIIG AFIFGIGIVL AGGCATGTWY RAGEGLIGSW VALVLYAVTA 120
  121 AITKTGILLP VMSWINKPTN INANMSQTTG IPMWVFTLVL TIITIIFVTK TLRKPKPKFA 180
  181 VPKLKQKYSG LRHYLFEKRY HPFVAGIAVG LIALIAWPMS ISTGRDYGLG ITTPSANLIT 240
  241 FLITGDTKLI DWGVLLILGI FLGSYIAAKG SREFKWRLPD KKTIRNSAIG GICMGFGASV 300
  301 AGGCSIGNGL VETAIMSWKG WIALGSMILG VWFMSYFIFI RPMKKLEKQT SKSQATTATK 360
  361 QVQTT