YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68446672, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVEIYSMSFT HSSLIINIIL IAAFILNLIF AFVIIFMERR SAGSIWAWLL VLVFLPIIGF  60
   61 ILYLLLGRQI QRNRIFKLKK EDRKGLAMIV DEQIEALESD DFSKGNHQIV KFKEMVRMLL 120
  121 FNNAAFLTTD NQTKIYTDGH AKFDALLSDI KNAKDYIHIQ YYIFKSDELG HRILSALEDK 180
  181 LDEGLEVKML YDDMGSRTLR KKDLKHFRQK GGHVESFFPS KLPLINLRMN NRNHRKIVII 240
  241 DGKIGYVGGF NVGDEYLGKD KKFGYWRDTH LRLEGDSVNA LELRFILDWN SQSNRDSIEY 300
  301 EDRYFPDVDS GGTIGVQIAS SGPDEDWEQI KYGYLKMISS AKQSIYIQSP YFIPDQAFID 360
  361 AIKIAALGGV EVNIMIPNKP DHPFVYWATL KNAASLLSAG VKIYHYDNGF LHSKTLIIDD 420
  421 EIASVGTANM DNRSFTLNFE VNAFIYDEAI AAQLKEAFIQ DMKVSYRLTE DLYNKRSLWI 480
  481 KFKEGISQLL SPIL

Type	Start	End	Confidence
Non-Cytoplasmic	1	13	0.83
Transmembrane Helix	14	36	0.94
Cytoplasmic	37	44	0.79
Transmembrane Helix	45	66	0.96
Non-Cytoplasmic	67	494	0.88