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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73955246
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASRRQVGTN PECVTGRSAA CREGKHCPPA PGPGDTCTSA ASRSVESNRR YRGSQRVLAA  60
   61 LGWSWSTQEK DEPGISERAQ LGRCQRPLPP SPHHPTSPAY RNALGREGEG PPGTPEWRLR 120
  121 PGPAWERLAE LGAAGVRSPH LRWGPGRAAR RAFPGSPAPA GQAGARAMNQ GRGFAPGRGG 180
  181 SPRRAAGAGA RRNQSQDYLL LDSELGDDGG PQPPRPAYGY YPCLQDTDSR LAHRRQTILR 240
  241 EKGRRLANRG PAYMFNDRST SLSVEEERFL DAAEYGNIPV VRKMLEECLS LNVNCVDYMG 300
  301 QNALQLAVAN EHLEITELLL KKENLSRVGD ALLLAISKGY VRIVEAILSH PAFAEGKRLA 360
  361 TSPSQSEFQQ DDFYAYDEDG TRFSHDVTPI ILAAHCQEYE IVHTLLRKGA RIERPHDYFC 420
  421 KCSECNQKQK HDSFSHSRSR INAYKGLASP AYLSLSSEDP VMTALELSNE LAVLANIEKE 480
  481 FKNDYKKLSM QCKDFVVGLL DLCRNTAEVE AILNGDVEAC PSGGDHGRPN LSRLKLAIKY 540
  541 EVKKFVAHPN CQQQLLSIWY ENLSGLRQQT MAVKFLVVLA VAVGLPFLAL IYWFAPCSKM 600
  601 GKIMRGPFMK FVAHAASFTI FLGLLVMNAA DRFEGTKLLP NETSTDNARQ LFRMKTSCFS 660
  661 WMEMLIISWV IGMIWAECKE IWTEGPKEYL FELWNMLDFG MLAIFAASFI ARFMAFWHAS 720
  721 KAQHIIDTND TLKDLTKVTL GDNVKYYNLA RIKWDPSDPQ IISEGLYAIA VVLSFSRIAY 780
  781 ILPANESFGP LQISLGRTVK DIFKFMVIFI MVFVAFMIGM FNLYSYYIGA KQNEAFTTVE 840
  841 ESFKTLFWAI FGLSEVKSVV INYNHKFIEN IGYVLYGVYN VTMVIVLLNM LIAMINSSFQ 900
  901 EIEDDADVEW KFARAKLWFS YFEEGRTLPV PFNLVPSPKS LFYLLLRLKK WISEMFQGHK 960
  961 KGFQEDAEMN KRNEENKFGI LGSHEDLSKL PLDKKQLGHS KQSSVRSSED FQLNSFNNPP1020
 1021 RQYQKIMKRL IKRYVLQAQV DKESDEVNEG ELKEIKQDIS SLRYELLEEK TQTSEDLAEL1080
 1081 IRKLGEKLSM EPKQEESNR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle