YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73955042
Protein type:	Transmembrane
Type Confidence:	0.90
Topology Confidence:	0.44
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPIPLPIFFL SAQIGYIGEG LAGCVLPLLL AFFPGQKVFK SDQSAGALPR PWRVTEGLTA  60
   61 TNRRRAGPWA RAAAVGLRRA AVRCPLRGVP LHSSSTSRSM SGRGKTGGKA RAKAKSRSSR 120
  121 AGLQFPVGRV HRLLRKGHYA ERVGAGAPVY LAAVLEYLTA EILELAGNAA RDNKKTRIIP 180
  181 RHLQLAIRND EELNKLLGGV TIAQGGVLPN IQAVLLPKKT SATVGPKAPA GGKKATQASQ 240
  241 EY

Type	Start	End	Confidence
Cytoplasmic	1	11	0.44
Transmembrane Helix	12	33	0.81
Non-Cytoplasmic	34	242	0.62