YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73954893
Protein type:	Globular with Signal Peptide
Type Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGVVVPAPW PGGAAAGVGA GALLRPGSMA DLAPQPGKRK REQDAEEAAT DQEQAGVGNG  60
   61 TSAPVQLPFS GFRVEKVLRE SARDKILFLH GKVNEASGDG GGEDAIVILE KTPFQVEQVA 120
  121 QLLMGRPELQ LQFSNDIYST YHLFPPRQLS DVKATVVYPA TEKHLQKYLR QDLRLVQETG 180
  181 SDYKNITLPY LESQSLSIQW VYNILDKKAE TDRMVFENPD PSDGFVLIPD LKWNQQQLDD 240
  241 LYLIAICHRR GIRSLRDLTP EHLPLLRNIL REGQEAILQR YQVRGDRLRV YLHYLPSYYH 300
  301 LHVHFTALGF DAPGSGVERA HLLADVIENL ECDPEHYQRR TLTFALRADD PLLRLLQEAQ 360
  361 KS

Type	Start	End	Confidence
Signal Peptide	1	30	0.86
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	362	0.98