YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73954359
Protein type:	Transmembrane
Type Confidence:	0.75
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGQWVQPAG YTVVWNHMEY LVRLLTEQET ERQRGEMTCP SPILVDITIG LCTWLFSILS  60
   61 VTLYSHHVSI LSDNNTEFGH LLFRSRLVGS PCPYCKASTD LLVVSTTSGQ LLASEENILL 120
  121 SPAAPWWARE MSEAGVRRHL QSISLSRDRL RTRAGPFKAL ERVSVLVSAA RPRPVTCKRA 180
  181 SRRQFGRESG AMPKSKELVS SSSSGSDSDS EVDKKLKRKK QVTPEKPVKK QKTGETSRAL 240
  241 SSSKQSSSSR DDNMFQIGKM RYVSVRDFKG KVLIDIREYW MDPEGEMKPG RKGISLNPEQ 300
  301 WSQLKEQISD IDDAVRKL

Type	Start	End	Confidence
Cytoplasmic	1	42	0.71
Transmembrane Helix	43	64	0.68
Non-Cytoplasmic	65	318	0.97