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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73954335
Protein type: Transmembrane
Type Confidence: 0.93
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRYGAWVIVA AGDQESSPPL PHLVPCLRPQ KEPRDYKRTF AASPQKDLRG KGGTIRRKGL  60
   61 KNKTWEWGQE NEELDGQSPP GKPEILKCRS PEKETFTCWW KPGDDGGLPT NYTLTYHKEG 120
  121 ETLTHECPDY ITSGPNSCYF NKKHTSIWTM YIITINATNQ MGSSSSDPRY VDVTYIVEPD 180
  181 PPVNLTLELK QPEDKKPYLW MKWYPPTLVD VRSGWLTLQY EIRLKPKKAT EWETHFAGQQ 240
  241 TQFKILSLYP GQKYLVQVRC KPDHGFWSEW SPESSIQIPN DVTMKDTIVW IFVAVLSAVI 300
  301 CLIMVVAVAL KGHSMVTCIL PPVPGPKIKG FDTHLLEKGK SEELLSALGC QDFPPTSDCE 360
  361 DLLVEFLEVD DSEDQQLMPA HPKEHPGQER KPTPLDPDSD SGRGSCDSPS LLSKKCEEAR 420
  421 ADPSAFNTPK SVEKPENPQT NVTYTWGSRS TSSEGKIPYF AAGGFKSSTW PLPQPPSQHS 480
  481 PRSSYHNIAD VCKLNMGTAG ASATLLDKTD TRALRSSKTT ETGGEEKAAE QREVESFHSK 540
  541 TDQDTPWLLP QEKTPLISVR PLDYVEIHKV NKDGALSLLP KQKENSGQAE KPSTPEASKE 600
  601 YAKVSRVMDN NILVLVQEPR AQNLASFEEP AKEAAPSHQQ NQAEEDLASF TSAPSGCGLQ 660
  661 RAGLDYLDPT CFMHSFQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle