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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73954311
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSSLLGSAM PASTSASGLQ EALENAGRLI DRQLQEDRMY PDLSELLLVS APNNPTVSGM  60
   61 SDMDYPLQGP GLLSVPNLPE ISSIRRVPLP PELVEQFGHM QCNCMMGVFP PISRAWLTID 120
  121 SDIFMWNYED GGDLAYFDGL SETILAVGLV KPKAGIFQPH VRHLLVLATP VDIVILGLSY 180
  181 ANLQTGIGNY IMCGGMQLLP DPLYSLPTDN TYLLTITSTD NGRIFLAGKD GCLYEVAYQA 240
  241 EAGWFSQRCR KINHSKSALS FLVPSLLQFT FSEDDPIVQI AIDNSRNILY TRSEKGVIQV 300
  301 YDLGQDGQGM SRVASVSQNS IVSAAGNIAR TIDRSVFKPI VQIAVIENSE SLDCQLLAVT 360
  361 HAGVRLYFST CPFRQPLARP NTLTLVHVRL PPGFSASSTV EKPSKVHKAL YSKGILLMAA 420
  421 SENEDNDILW CVNHDTFPFQ KPMMETQMTT RVDGHSWALS AIDELKVDKI ITPLNKDHIP 480
  481 ITDSPVVVQQ HMLPPKKFVL LSAQGSLMFH KLRPVDQLRH LLVSNVGGDG EEIERFFKLH 540
  541 QEDQACATCL ILACSLLPVI EKYGGEAQMR FPTTLPAPSN VGPILGSPVY PSSPIPSSSP 600
  601 YPNPSFLGTP SQGVHPPAMS TPVCVSGNPA TQAASMSCMA APEIVYSGKH NGICIYFSRI 660
  661 MGNIWDASLV VERVFKSGNR EITAIESSVP SQLLESVLQE LKGLQEFLDR NSQFAGGPLG 720
  721 NPNTTAKVQQ RLIGFMRPEN GNTQQMQQEL QRKFHEAQLS EKVSLQAIQQ LVRKSYQALA 780
  781 LWKLLCEHQF TVIVGELQKE FQEQLKITTF KDLVIRDKEL TGALIASLIN CYIRDNAAVD 840
  841 GISLHLQDIC PLLYSTDDAI CSKANELLQR SRQVQNKIEK ERMLRESLKE YQKISNQVDL 900
  901 SNVCAQYRQV RFYEGVVELS LTAAEKKDPQ GLGLHFYKHG EPEEDIVGLQ AFQERLNSYK 960
  961 CITDTLQELV NQSKAAPQSP SVPKKPGPPV LSSDPNMLSN EEAGHHFEQM LKLSQRSKDE1020
 1021 LFSIALYNWL IQADLADKLL QIASPFLEPH LVRMAKVDQN KVRYMDLLWR YYEKNRSFSN1080
 1081 AARVLSKLAD MHSTEISLQQ RLEYIARAIL SAKSSTAISS IAADGEFLHE LEEKMEVARI1140
 1141 QLQIQETLQR QYSHHSSVQD AISQLDSELM DITKLYGEFA DPFKLAECKL AIIHCAGYSD1200
 1201 PILVQTLWQD IIEKELNESV TLSSPDRMHA LSLKVVLLGK IYAGTPRFFP LDFIVQFLEQ1260
 1261 QVCTLNWDVG FVIQTMNEIG VPLPRLLEVY DHLFKSRDPF WNRMKKPLHL LDCIHVLLAR1320
 1321 YVENPSQVLN CERRRFTNLC LDAICGYLVE LQSMSSSVAV QAITGNFKSL QAKLERLH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle