YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73954250
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSAGGRPGS ALAAGGSEKP AALSLAGSGA ARAETRKRRA SVSVPVGRLT REEGHEKDNA  60
   61 GQVTLVPEEL RDMWHTYNLV QVGDSLRAST IRKVQTESST GSVGSNRVRT TLTLCVEAID 120
  121 FDSQACQLRV KGTNIQENEY VKMGAYHTIE LEPNRQFTLA KKQWDSVVLE RIEQACDPAW 180
  181 SADVAAVVMQ EGLAHICLVT PSMTLTRAKV EVNIPRKRKG NCSQHDRALE RFYEQVVQAI 240
  241 QRHINFDVVK CILVASPGFV REQFCDYMFQ QAVKTDNKLL LENRSKFLQV HASSGHKYSL 300
  301 KEALCDPSVA SRLSDTKAAG EVKALDDFYK MLQHEPDRAF YGLKQVEKAN EAMAIDTLLI 360
  361 SDELFRHQDV ATRSRYVKLV DSVKENAGTV RIFSSLHVSG EQLSQLTGVA AILRFPVPEL 420
  421 SDQEDDSSSE ED

Type	Start	End	Confidence
Signal Peptide	1	33	0.87
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	432	0.99