YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73954248
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METGIDTDKE DYSLQSSLPS GMGIVLGFCV SFNVDVKNSM TFSGPVEDMF GYTVQQYENE  60
   61 EGKWVLIGSP LVGQPKNKTG DVYKCPVGRG KPLPCIKLDL PVNTSIPNVT EVKENMTFGS 120
  121 TLVTNPNGGF LACGPLYAYR CGHLHYTTGI CSDVSPTFQV VNSIAPVREC STQLDIVIVL 180
  181 DGSNSIYPWE SVTAFLNDLL ERMDIGPKQT QVGIVQYGEN VTHEFNLNKY SSTEEVLVAA 240
  241 NQIIQRGGRQ TMTALGIDTA RKEAFTEARG ARRGVKKVMV IVTDGESHDN HLLNKVIQDC 300
  301 EDENIQRFSI AILGSYNRGN LSTEKFVEEI KSIASEPTEK HFFNVSDELA LVTIVEALGE 360
  361 RIFALEATAD QSAASFEMEM SQTGFSAHYS QDWVMLGAVG AYDWNGTVVM QKANQIIIPH 420
  421 NTTFNVESTK KNEPLASYLG YTVNSATVSG AVLYIAGQPR YNHTGQVVIY RMDDGDIKIL 480
  481 QTLSGEQIGS YFGSVLTTID IDKDSNTDIL LVGAPMYMGT EKEEQGKVYV YALNQTRFEY 540
  541 QMSLEPIKQT CCSSLKHNSC TKENKNEPCG ARFGTAIAAV RDLNLDGFDD IVIGAPLEDD 600
  601 HGGAVYIYHG SGKTIRKEYA QRIPSGGDGK TLKFFGQSIH GEMDLNGDGL TDVTIGGLGG 660
  661 AALFWSRDVA VVKVTMNFEP NKVNIQKKNC RVEGKETVCI NATVCFDVKL KSKEDTIYIA 720
  721 DMQYRVTLDS LRQISRSFFS GTQERKIQRN ITVEESECTK LSFYMLDKHD FRDSVRITLD 780
  781 FNLTDPENGP VLDDSLPNSV HEYIPFAKDC GNKEKCISDL ALKVSTTEKG LLIVRSHNDK 840
  841 FNVSLTVKNK KDSAYNTRTI VHYSPNLIFS GIEAIQKDSC ESNHNLTCKV GYPFLRRGEE 900
  901 VTFKILFQFN TSYLMENVVI HLSATSDSEE PPEALSDNEV NISIPVKYEV GLQFYSSASE 960
  961 YHISIAANET VPEVINSTED IGDEINIFYL IRKSGHFPMP ELKLSISFPN LTSDGYPVLY1020
 1021 PSGWSSSNNA NCRPSSLQDP LGVNSGKKTI ISKSEDLKRG TIPDCSTCKF ATITCNLIPS1080
 1081 DMSQINVSLI VWKPTFIKAR FSSLNLTVRA DLQSENTSLI LSTGNQKREF AIQISKDGLP1140
 1141 GRVPLWVILL SAFAGLLLLM LLILALWKIG FFKRPLKKKM EK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle