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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73954145
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATPPPLCFD RRLKSLARAS FEGRLAGADA APWTPHSPIS RLPSRAAPRP RPGDVGPGPP  60
   61 RPSQPRVGEP RRYSNRPAGP ARVTLRLGSA RGSGRRPPPS EEPRDGGREA GSAVLPAGAA 120
  121 RASTCLLIFW MLLGEGRLQT PVVAASGLGG DKALRILQNP ASISEAPGRS AVSGSFKLDS 180
  181 QKSFSRGALG LEPPLSSARK HKLSSRHVPA GASDCSVTGG AGPSLPSPRA GRGGRREERS 240
  241 LGRGGDLAAA GTRGAAQMKG EAGSMQHNEK PKQEGHIWGS MRRTAFILGS GLLLLVAFWN 300
  301 SVTWHLQRFW GASGYFWQAQ WEKLLSTFEG MEWMLYFIGA IQVPGLLFWS FNGLLLVVDT 360
  361 TGKPNFISRY RIQVGKNEPV DAEKLRRSIR TVLFNQYMIS LPMVVLLYPV LKLWGNPCRR 420
  421 ELPTFHWFLL ELTVFTLIEE VLFYYSHRLL HHPTFYKKIH KKHHEWTAPI GVISFYAHPI 480
  481 EHVVSNTLPV MVGPILMGSH LSSITMWFSL ALIITTISHC GYHLPFLPSP EFHDYHHLKF 540
  541 NQCYGVLGVL DHLHGTDTLF KQTKAYERHI LLLGLTPLSE SIPDPPKKME 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle