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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73954068
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYSGKPLEGA KQESAKTYFC LENSIQTAVE KGCGQWGVEG RPIPPTSSSS LLPSAQLPSS  60
   61 HNPPPVSCQM PLLDSNTSHQ IMDTNPDEEF SPNSYLLRAC SGPQQASSSG PPNHHSQSTL 120
  121 RPPLPPPHNH TLSHHHSSAN SLNRNSLTNR RSQIHAPAPA PNDLATTPES VQLQDSWVLN 180
  181 SNVPLETRHF LFKTSSGSTP LFSSSSPGYP LTSGTVYTPP PRLLPRNTFS RKAFKLKKPS 240
  241 KYCSWKCAAL SAIAAALLLA ILLAYFIAMH LLGLNWQLQP ADGHTFNNGI RTGLPGNDDV 300
  301 ATMPSGGKVP WSLKNSSIDS GEAEVGRRVT QEVPPGVFWR SQIHISQPQF LKFNISLGKD 360
  361 ALFGVYIRRG LPPSHAQYDF MERLDGKEKW SVVESPRERR SIQTLVQNEA VFVQYLDVGL 420
  421 WHLAFYNDGK DKEMVSFNTV VLDSVQDCPR NCHGNGECVS GLCHCFPGFL GADCAKAACP 480
  481 VLCSGNGQYS KGTCQCYSGW KGAECDVPMN QCIDPSCGGH GSCIDGNCVC SAGYKGEHCE 540
  541 EVDCLDPTCS SHGVCVNGEC LCSPGWGGLN CELARVQCPD QCSGHGTYVP DTGLCSCDPN 600
  601 WMGPDCSVEV CSVDCGTHGV CIGGACRCEE GWTGAACDQR VCHPRCIEHG TCKDGKCECR 660
  661 EGWNGEHCTI DGCPDLCNGN GRCTLGQNSW QCVCQTGWRG PGCNVAMETS CADNKDNEGD 720
  721 GLVDCLDPDC CLQSACQNSL LCRGSRDPLD IIQQGQTDSP AVKSFYDRIK LLAGKDSTHI 780
  781 IPGDNPFNSS LVSLIRGQVV TTDGTPLVGV NVSFVKYPKY GYTITRQDGT FDLIANGGAS 840
  841 LTLHFERAPF MSQERTVWLP WNSFYAMDTL VMKTEENSIP SCDLSGFVRP DPIIISSPLS 900
  901 TFFSAAPGHN PIVPETQVLH EEIELPGSNV KLRYLSSRTA GYKSLLKITM TQSTVPLNLI 960
  961 KVHLMVAVEG HLFQKSFQAS PNLAYTFIWD KTDAYGQRVY GLSDAVVSVG FEYETCPSLI1020
 1021 LWEKRTALLQ GFELDPSNLG GWSLDKHHIL NVKSGILHKG TGENQFLTQQ PAIITSIMGN1080
 1081 GRRRSISCPS CNGLAEGNKL LAPVALAVGI DGSLFVGDFN YIRRIFPSRN VTSILELRNK1140
 1141 EFKHSNNPAH KYYLAVDPVS GSLYVSDTNS RRIYRVKSLS GAKDLAGNSE VVAGTGEQCL1200
 1201 PFDEARCGDG GKAVDATLMS PRGIAVDKNG LMYFVDATMI RKVDQNGIIS TLLGSNDLTA1260
 1261 VRPLSCDSSM DVAQVRLEWP TDLAVNPMDN SLYVLENNVI LRITENHQVS IIAGRPMHCQ1320
 1321 VPGIDYSLSK LAIHSALESA SAIAISHTGV LYITETDEKK INRLRQVTTN GEICLLAGAA1380
 1381 SDCDCKNDVN CNCYSGDDAY ATDAILNSPS SLAVAPDGTI YIADLGNIRI RAVSKNKPVL1440
 1441 NAFNQYEAAS PGEQELYVFN ADGIHQYTVS LVTGEYLYNF TYSADNDVTE LIDNNGNSLK1500
 1501 IRRDSSGMPR HLLMPDNQII TLTVGTNGGL KVVSTQNLEL GLMTYDGNTG LLATKSDETG1560
 1561 WTTFYDYDHE GRLTNVTRPT GVVTSLHREM EKSITIDIEN SNRDDDVTVI TNLSSVEASY1620
 1621 TVVQDQVRNS YQLCNNGTLR VMYANGMGVS FHSEPHVLAG TITPTIGRCN ISLPMENGLN1680
 1681 SIEWRLRKEQ IKGKVTIFGR KLRVHGRNLL SIDYDRNIRT EKIYDDHRKF TLRIIYDQVG1740
 1741 RPFLWLPSSG LAAVNVSYFF NGRLAGLQRG AMSERTDIDK QGRIVSRMFA DGKVWSYSYL1800
 1801 DKSMVLLLQS QRQYIFEYDS SDRLHAVTMP SVARHSMSTH TSIGYIRNIY NPPESNASVI1860
 1861 FDYSDDGRIL KTSFLGTGRQ VFYKYGKLSK LSEIVYDSTA VTFGYDETTG VLKMVSLQSG1920
 1921 GFSCTIRYRK IGPLVDKQIY RFSEEGMVNA RFDYTYHDNS FRIASIKPVI SETPLPVDLY1980
 1981 RYDEISGKVE HFGKFGVIYY DINQIITTAV MTLSKHFDTH GRIKEVQYEM FRSLMYWMTV2040
 2041 QYDSMGRVIK RELKLGPYAN TTKYTYDYDG DGQLQSVAVN DRPTWRYSYD LNGNLHLLNP2100
 2101 GNSVRLMPLR YDLRDRITRL GDVQYKIDDD GYLCQRGADI FEYNSKGLLT RAYNKASGWS2160
 2161 VQYRYDGVGR RASYKTNLGH HLQYFYSDLH NPTRITHVYN HSNSEITSLY YDLQGHLFAM2220
 2221 ESSSGEEYYV ASDNTGTPLA VFSINGLMIK QLQYTAYGEI YYDSNPDFQM VIGFHGGLYD2280
 2281 PLTKLVHFTQ RDYDVLAGRW TSPDYTMWKN VGKEPAPFNL YMFKSNNPLS NELDLKNYVT2340
 2341 DVKSWLVMFG FQLSNIIPGF PRAKMYFVPP PYELSESQAS ENGQLITGVQ QTTERHNQAF2400
 2401 MALEGQVISK KLHANIREKA GHWFATTTPI IGKGIMFAIK EGQVTTGVSS IASEDSRKVA2460
 2461 SVLNNAYYLD KMHYSIEGKD THYFVKIGSA DGDLVTLGTT IGRKVLESGV NVTVSQPTLL2520
 2521 VNGRTRRFTN IEFQYSTLLL SIRYGLTPDT LDEEKARVLD QARQRALGTA WAKEQQKARD2580
 2581 GREGIRLWTE GEKQQLLSTG RVQGYEGYYV LPVEQYPELA DSSSNIQFLR QNEMGKR

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