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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73952731
Protein type: Globular with Signal Peptide
Type Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADEAALALQ PGGSPSAVAA EREAASPPAG EPLRKRPRRD CPGLGRSPGE PGGAAPEREV  60
   61 PAATGGCSAA AAALWREAAA GGEREAQAAV AAAGEGDNGP GLQGLTREPL PADDFVDDDD 120
  121 DDEGEEEEEA AAASAIGYRD NLLFDDEIIT NGFHSCESDE DDRASHASSS DWTPRPRIGP 180
  181 YTFVQQHLMI GTDPRTILKD LLPETIPPPE LDDMTLWQIV INILSEPPKR KKRKDINTIE 240
  241 DAVKLLQECK KIIVLTGAGV SVSCGIPDFR SRDGIYARLA IDFPDLPDPQ AMFDIEYFRK 300
  301 DPRPFFKFAK EIYPGQFQPS LCHKFIALSD KEGKLLRNYT QNIDTLEQVA GIQRIIQCHG 360
  361 SFATASCLIC KYKVDCEAVR GDIFNQVVPR CPRCPADEPL AIMKPEIVFF GENLPEQFHR 420
  421 AMKYDKDEVD LLIVIGSSLK VRPVALIPSS IPHEVPQILI NREPLPHLHF DVELLGDCDV 480
  481 IINELCHRLG GEYAKLCCNP VKLSEITEKP PRTQKELAHL SELPPTPLNI SEDSSSPERT 540
  541 SPPDSSVIVT LLDEATKSNV DDPGVSESRD CMEEKSQEGQ NSIRNIESVT EHLESPDLKN 600
  601 VGCNTGEKNE RTSVADPVRK CWPARLAKEQ ISKRLDGNQY LFLPPNRYIF HGAEVYSDSE 660
  661 DDVLSSSSCG SNSDSGTCQS PSLEEHLEDE SEIEEFYNGL EDEADVNERA GGTGFGIDGG 720
  721 DQEAVNEAIS MKQEATDTNY PSNKS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle