YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73952314
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPIEIRCAAE QSFIMTSMQT LMFKDHIHAF LQSGWVSLSG TDYWAGSSHN FESSFWWWVV  60
   61 STSISLLSLE EFNNQQENLK SALLAGLQGS CLMEWKNESR QQKYEVKLYQ VKALRAAPTR 120
  121 ARARPSGARL PRRTTCPIIL QSRRGGALSG LRFPQSSDTA LWSSLRSLPA SHLPLRPRRA 180
  181 EEQGRGGERA GCCRSCRLGA RGSRRTFSGA MLGQSIRRFT TSVVRRSHYE EGPGKNLPFS 240
  241 VENKWRLLLM MTLYFGSGFA APFFIVRHQL LKK

Type	Start	End	Confidence
Non-Cytoplasmic	1	246	0.64
Transmembrane Helix	247	266	0.92
Cytoplasmic	267	273	0.52