YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73952301
Protein type:	Transmembrane
Type Confidence:	0.86
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGRHQNRSF PLPGVHSSGQ VHAFGNCTDS DVLEEDAEVY ELRSRGKEKI RRSTSRDRLD  60
   61 DIIVLTKDIQ EGDTLNAIAL QYCCTVADIK RVNNLISDQD FFALRSIKIP VKKFSSLTET 120
  121 LYPPKGRQAS RPSSVQYVPE QQEILPPNDS LSSSESADNF LKEVDRDIEQ IVKCTDTKKE 180
  181 NLNEVVSALT AQQIRFEPDN KNIQRKDPYY GADWGIGWWT AVVIMLIVGI ITPVFYLLYY 240
  241 EILAKVDVSH HSTMDSSHLH SGVTPPSQQR EMENGIGPTK GIPFGQHDHK LYSQDSQSPA 300
  301 AQHKT

Type	Start	End	Confidence
Cytoplasmic	1	214	0.65
Transmembrane Helix	215	239	0.85
Non-Cytoplasmic	240	305	0.69