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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73952215
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSRLFRMHG LFVASHPWEV IVGTVTLTIC MMSMNMFTGN DKICGWNYEC PKFEEDVLSS  60
   61 DIIILTITRC IAILYIYFQF QNLRQLGSKY ILGIAGLFTI FSSFVFSTVV IHFLDKELTG 120
  121 LNEALPFFLL LIDLSRASAL AKFALSSNSQ DEVRENIARG MAILGPTFTL DALVECLVIG 180
  181 VGTMSGVRQL EIMCCFGCMS VLANYFVFMT FFPACVSLVL ELSRESREGR PIWQLSHFAR 240
  241 VLEEEENKPN PVTQRVKMIM SLGLVLVHAH SRWIADPSPQ NSTSENSRVS LGLDENVSKR 300
  301 IEPSVSLWQF YLSKMISMDI EQVVTLGLAL LLAVKYIFFE QAETESTLSL KNPITSPVVT 360
  361 PKKVPDDCCR REPVLVRNSH KVHAAEEETR INRERKVEVI KPFVAETDTS SRATFVVGNS 420
  421 SLLDTSVELE TQEPEIELPM EPRPNEECLQ ILGNAEKGAK FLSDAEIIQL VNAKHIPAYK 480
  481 LETLMETHER GVSIRRQLLS RKLPEPSSLQ YLPYRDYNYS LVMGACCENV IGYMPIPVGV 540
  541 AGPLCLDGKE FQVPMATTEG CLVASTNRGC RAIGLGGGAS SRILADGMTR GPVVRLPRAC 600
  601 DSAEVKAWLE TPEGFTVIKE AFDSTSRFAR LQKLHMSMAG RNLYIRFQSR SGDAMGMNMI 660
  661 SKGTEKALSK LHEHFPEMQI LAVSGNYCTD KKPAAINWIE GRGKSVVCEA VIPAKVVREV 720
  721 LKTTTEAMIE VNINKNLVGS AMAGSIGGYN AHAANIVTAI YIACGQDAAQ NVGSSNCITL 780
  781 MEASGPTNED LYISCTMPSI EIGTVGGGTN LLPQQACLQM LGVQGACKDN PGENARQLAR 840
  841 IVCGTVMAGE LSLMAALAAG HLVKSHMIHN RSKINLQDLQ GTCAKKAA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle