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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73951795
Protein type: Transmembrane
Type Confidence: 0.87
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASILLRSCR GRGPARLPPP LEVLVPRGST GNGACLGCAS TVGLISHLNV PFHCCTPVHP  60
   61 IHLAFRANPR GCWTVRPERV CVAAGVPWTP TSANLLIPGL QFLPLRCWHS SPPLRDDSVV 120
  121 EKSLKSLKDK NKKLEEGGPV YSPPVEVAVK KSLGQRVLDE LKHYYHGFRL LWIDTKIAAR 180
  181 MLWRILHGHT LTRRERRQFL RICADLFRLV PFLVFVVVPF MEFLLPVAVK LFPNMLPSTF 240
  241 ETQSIKEERL KKELRVKLEL AKFLQDTIEE MALKNKAAKG NATKDFSVFF QKIRETGERP 300
  301 SNEEILRFSK LFEDELTLDN LTRPQLVALC KLLELQSIGT NNFLRFQLTM RLRSIKADDK 360
  361 LIAEEGVDSL NVKELQSACR ARGMRALGVT EDRLRDQLKQ WLELHLHQEI PTSLLILSRA 420
  421 MYLPDTLSPA DQLKSTLQTL PEIVAKEAQV KVAEVEGEQV DNKAKLEATL QEEAAIQQEH 480
  481 REKELQRLSE AAKEVEPDVV AEAAPGRSVA KLQPEVPEVT LPSEALQDTA PVLEGLKEEE 540
  541 ITKEEIDILS NACSKLKEQK SSLTKEKEEL ELLKEDVQDY SEDLQEIKKE LSKTGEEIYV 600
  601 EESKASKRLT KRVQQMIGQI DSLLSQLEMD QKAGKLGPAA ESPPVGDNVI SINELISAMK 660
  661 QIKHIPENKL MSLASALDEN KDGKINIDDL VKVIELVDKE DVHISTSQVA EIVALLEKEE 720
  721 KVEEKEKAKE KAEKEAAEVK N

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle