YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73951475
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDAFTRFTNQ TQGRDRLFRA TQYTCMLLRY LLEPKAGKEK VVMKLKKLES SVSTGRKWFR  60
   61 LGNVVHAVQA TQQSIHATDL VPRVCLTLAN VNRVIYFICD TILWVRSVGL ASGINKEKWR 120
  121 MWAARHYYYS LLLSLARDLY EISLQMEKIA HNRAKREKSL SQDPLEYNVA DEETEWLQSF 180
  181 LLLLFRSLKK HPPLFLDTVK NFCDILNPLD QLGIYKSNPG LIGLGGLVSS IAGIIIVAYP 240
  241 QMRLKMH

Type	Start	End	Confidence
Non-Cytoplasmic	1	219	0.70
Transmembrane Helix	220	240	0.92
Cytoplasmic	241	247	0.66