YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73951430
Protein type:	Globular with Signal Peptide
Type Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAPVGRTVL GVAKGWRRLE GLRTASLGSR SLSLAAAPSS SGSPWRLLGA LCLQRPPLVS  60
   61 KPLTPLQEEM AALFQQIEVE RSMYSDHELR ALDEARRLAK KKADLYDEED DEQDILLVQD 120
  121 LEEVWEQKFL QFKPGARITE ADKKNDRTSL QRKLDRNLVL LVKEKLGDQD VWMLPQAEWQ 180
  181 PGETLRGTAE RTLATLSENN LEAKFLGNAP CGHYKFKFPQ ALRTESSLGA KVFFFKALLL 240
  241 TGDFSQTSKK DHHVWVCKEE LGDYLKPKYL TQVRRFLLDL

Type	Start	End	Confidence
Signal Peptide	1	42	0.59
N-region	1	33
H-region	34	39
C-region	40	42
Cleavage Site	42	43
Non-Cytoplasmic	43	280	0.99