YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73950741
Protein type:	Globular with Signal Peptide
Type Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRRVAAGCA RALGTGGGAR PVSGLSPPGR SASSGSPDAS RNQPPSSEFL ARPVGVCSMM  60
   61 RLPVQASPEG LDAAFVGVPL DIGTSNRPGA RFGPRRIREE SVLLRTANPS TGALPFQSLM 120
  121 VADLGDVNVN LYNLQDSCRL IREAYEKIVA AGCIPLTLGG DHTITYPILQ AMAKKHGPVG 180
  181 LLHVDAHTDT ADKALGEKVY HGTPFRRCVD EGLLDCERVV QVGIRGSATT LDPYRYSRSQ 240
  241 GFRVVLAEDC WMKSLVPLMA DVRRQMGGKP LYISFDIDGL DPAYAPGTGT PEIAGLTPSQ 300
  301 GLEIIRGCQG LNVVGCDLVE VSPPYDPFGN TALLAANLLF EMLCALPKVT VV

Type	Start	End	Confidence
Signal Peptide	1	21	0.86
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	352	0.99