YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73950573
Protein type:	Globular with Signal Peptide
Type Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSSGAVRRS PRRPRASRDV TQQSGSARTC APLPALSPPG PLSLAMGRAR RTGAHRARSL  60
   61 ARQMKAKRRR PDLDEIHREL RPQVPARSRP DPASEPDPDL PGGGLHRCLA CARYFIDSAT 120
  121 LKTHFRSKDH KKRLKQLSVE PYSQEEAERA AGMGSYVTPQ RLAVPMEVST EVPEMVTTPC 180
  181 MT

Type	Start	End	Confidence
Signal Peptide	1	45	0.68
N-region	1	36
H-region	37	42
C-region	43	45
Cleavage Site	45	46
Non-Cytoplasmic	46	182	0.99