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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73950335
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGGDRGRKR ESRWWGRVSR EAGEGGGGAL AEAQTLSVLL ELELELELEP EPPAPSALLT  60
   61 VQEQLGLFHK RRCDPKTEDE TSTEQAVGGG SKENSTEAHM VTAVGGGSGP NRAVVAVNWL 120
  121 RLYGYLPQPS RHMSTMRSAQ ILASALAEMQ RFYGIPVTGV LDEETKAWMK RPRCGVPDQF 180
  181 GVRVKANLRR RRKRYALTGR KWNNHHLTFS IQNYTEKLGW YHSLEAVRRA FRVWEQATPL 240
  241 VFQEVPYEDI RLRRQKEADI MVLFASGFHG DSSPFDGTGG FLAHAYFPGP GLGGDTHFDA 300
  301 DEPWTFSSTD LHGNSLFLVA VHELGHALGL EHSSNPSAIM APFYQWMDTD TFQLPEDDLR 360
  361 GIQQLYGTPD GQPQPTRPLP TVTPRRPGRP DHRPPRPPQP PPPGGKPERP PKPGPPAQPR 420
  421 ATERPDQYGP NICDGDFDTV AMLRGEMFVF KGRWFWRVRH NRVLDNYPMP IGHFWRGLPS 480
  481 DISAAYERQD GRFVFFKGDR YWLFREANLE PGYPQPLTSY GLGIPYDRID TAIWWEPTGH 540
  541 TFFFQEDRYW RFNEETQRGD PGYPKPISVW QGIPTSPKGA FLSNDAAYTY FYKGTKYWKF 600
  601 DNERLRMEPG YPKSILRDFM GCQEQVEPGP RWPDVARPPF NPDGGAEPGA GGDGEEGEEG 660
  661 HEPGTGGRDQ DSGEDTDEDG GSRVVVQLEE VTRTVNMVMV LVPPLLLLLC ILGLTYALVQ 720
  721 MQRKGAPRML LYCKRSLQEW V

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle