YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57042784
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPLTAYPLR CSGSKAKVFA VLLSMVLCTV MLFLLQLKFL KPKINSFYTF EVKDAKGRTV  60
   61 SLEKFKGKVT LVVNVASDCQ LTDRNYLALQ ELHKEFGPFH FSVLAFPCNQ FGESEPRPSK 120
  121 EVVSFARNNY GATFPIFHKI KILGSEADPA FRFLVDSSKK EPRWNFWKYL VNPEGQVVKS 180
  181 WRPEEPIEVI RPEIAALVRQ MILRKKDDL

Type	Start	End	Confidence
Cytoplasmic	1	17	0.74
Transmembrane Helix	18	37	0.87
Non-Cytoplasmic	38	209	0.86