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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73948954
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGMLVFEASP WYCCLQDPAA TIGDILVDTR QFLIYNEDHK RCVEAVSPSA VQTATCNQDN  60
   61 EAQKFRWVSE SRIMSIAFKL CLGVPSKTDW VAVTLYACDP KSEFQKWECK NDTLLGIKGE 120
  121 DLFFNYGNKQ EKNIMLYKGS GLWSRWKVYG TTDDLCSRGY EDMYTLLGNA NGAACAFPFK 180
  181 FENKWYADCT SAGRSDGWLW CGTTADYDAD KLFGYCPLKF EGSESLWNKD PLTGISYQIN 240
  241 SKSALTWHQA RRSCQQQSAE LLSITEIHEQ TYLTGLTTSL TSGLWIGLNS LSFNSGWQWS 300
  301 GGSPFRYLNW LPGSPSAEPG KSCVSLNPGK NAKWENLECV QRLGYICKKG NTTLNSFVIP 360
  361 SESDVPTNCP SQWWPYAGHC YKIDRKEKKI QRDALTACRK EGGDLASVHS IEEFDFIISQ 420
  421 LGYEANDELW IGLNDIKIQM YFEWSDGTPV TFTKWLRGEP SHENNRQEDC VVMKGKDGYW 480
  481 ADRACERPLD YICKMKSQTQ PTGTVKAETG CQKGWKRHGF YCYLIGHTLS TFTEANQTCI 540
  541 NEKAYLTTIE DRYEQAFLTS LVGLRPERYF WTGLSDVQNK GTFQWTIEEK VLFTHWNSDM 600
  601 PGRKTGCVAM RTGLAGGLWD VLRCEEKAKF VCKHWAEGVT RPPEPTTTPE PKCPEDWGTN 660
  661 SKTSLCFKLF AKGKHEKKTW FESRDFCRAL GGDLASINNK EEQQAIWRLI TASGSYHELF 720
  721 WLGLTYGSPS EGFTWSDGSP VSYENWAYGE PNNYQNVEYC GELKGDSGMS WNDINCEHLN 780
  781 NWICQIQKGK TPKPEPTPAP QDNPPVTEDG WVIYKDYQYY FSKEKETMDK AREFCKKNFG 840
  841 DLVSIQSESK KKFLWKYVNR NDAQPAYFIG LMISLDKKFI WMDGSKVDYV AWATGEPNFA 900
  901 NDDENCVTMY SNSGFWNDIN CGYPNAFICQ RHNSSINATV VPTVPSVPGG CKEGWHFYNN 960
  961 KCFKIFGFVE EERKNWQEAR KACIGFGGNL VSIHNEKEQA FLTYHMKDST FNAWIGLNDV1020
 1021 NSEHTFLWTD GRGVHFTNWG KGYPGGRRSS LSYEDADCVV IIGGKSRDAG KWMDDTCDSK1080
 1081 RGYICQTLPD SSLPNSPTTI PTDGFIKYGE SNYSLVRLKL EWHEAEKYCK LHTSLIASIL1140
 1141 DPYSNAFVWM QMQRFNEPVW IALNSNLTNN EYAWTDKWRM RYTNWAADEP KLKSACVYLD1200
 1201 IDGHWKTAYC NESFYFLCKR SDEIPATEPP QLPGRCPESE HTAWIPFHGH CYYIESSFTR1260
 1261 NWGQASLECL RMGSSLVSIE SAAESSFLSY RVEPLQSKTN FWIGLFRNVE GMWLWINNNP1320
 1321 VSFVNWNTGD PSGERNDCVA LSASSGFWNN IHCSSYKGYI CKRPKIIDAE PTHTLIATKA1380
 1381 DPRKMDPFKP SSSVAGVVVM VVLLIITGAG LAAYFFHKKR HVHLPQENTF ENTLYFNSRS1440
 1441 SPGTSDTKDL VGNIEQNEHA GI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle