YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57036706
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSVAARSGP FAPVLSATSR GVAGALRPLV PASVPAAPEP PVLDARRPFL CRESLSGQAA  60
   61 RRAPVASAGL TVPASIRYSH TDIRVPDFSD YRRAEVLDGT KSSKESSEAR KGFSYLITAT 120
  121 TSIGVAYAAK NVVSQFVSSM SASADVLAMS KIEIKLSDIP EGKNMAFKWR GKPLFVRHRT 180
  181 KKEIEQEAAV EVSQLRDPQH DLDRVKKPEW VILIGVCTHL GCVPIANAGD FGGYYCPCHG 240
  241 SHYDASGRIR KGPAPLNLEV PSYEFTGDDM VIVG

Type	Start	End	Confidence
Signal Peptide	1	24	0.90
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	274	0.98