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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73948510
Protein type: Transmembrane
Type Confidence: 0.82
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLSGGPVNL FGGSGATLRA LSHQRCASIP LAACASTWLN HRLSLTLGPT PKYELTIKIM  60
   61 RWRKASNATA KQEREMAEMV PFMYILPQLR KIPKPPESDV NPYPNTWRVS ENSEQLVRGE 120
  121 HDSSRTCYSG RKVVTLWSSQ DSWGQGRAWS PVLTLEVRTL DCAVIQGPGP AGGALPAMAQ 180
  181 LLPQPPWPPS AEGGDPGASG PPAEWQSQPP QGRRADGLAP EPWRLLEVPS IHITPCSDGE 240
  241 SPPGTPTPQR LQLPRTPDPE SRPRDSTTPH SGRSTPSSSP SLRKRLQLLP SSRPPPEPEP 300
  301 GTMVEKGSDS SSEKGGGPGT PSTQSLGSRN FIRNSKKMQS WYSMLSPTYK QRNEDFRKLF 360
  361 SKLPEAERLI VDYSCALQRE ILLQGRLYLS ENWICFYSNI FRWETTISIQ LKEVTCLKKE 420
  421 KTAKLIPNAI QICTESEKHF FTSFGARDRC FLLIFRLWQN ALLEKTLSPR ELWHLVHQCY 480
  481 GSELGLTSED EDYVCPLQLN GLGSPKEVGD VIALSDITPS GAADNSQEPS PVGSRRGRLT 540
  541 PNLSRASSDA DHVAEEDKEE QTDSQPDASS SQTVTPVAEP PSTEPAPPNG PASLGPLDLL 600
  601 PSEEVLTDTS NSSSSTGEEA DLAALLPDLS GRLLINSVFH VGAERLQQML FSDSPFLQGF 660
  661 LQQCKFTDVT LSPWSGDNKC HQRRVLTYTI PISNPLGPKS ASVVETQTLF RRGPQAGGCV 720
  721 VDSEVLTQGI PYQDYFYTAH RYCILGLARN KARLRVSSEI RYRKQPWSLV KSLIEKNSWS 780
  781 GIEDYFHHLE RELAKAEKLS LEEGGKDARG LLSGLRRRKR PLSWRGHGDG PQHPDPDPCA 840
  841 RAGMHTSGSL SSRFSEPSVD QGPGAGIPSA LVLISIVICV SLIVLIALNV LLFYRLWSLE 900
  901 RTAHTFESWH SLALAKGKFP QTATEWAEIL ALQKQFHSVE VHKWRQILRA SVELLDEMKF 960
  961 SLEKLHQGIT VSDPPFDSQP RPDDSFS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle