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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73948281
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERGGGRSGE ESQRLGSPRQ TARARELSVQ HRPGGDWRLG PPALESGGSD SYRVATSQDK  60
   61 KDDKGSPKKS KGTKERRDLD DLKKEVAMTE HKMSVEEVCR KYNTDCVQGL THSKAQEILA 120
  121 RDGPNALTPP PTTPEWVKFC RQLFGGFSIL LWIGAILCFL AYGIQAGTED DPSGDNLYLG 180
  181 IVLAAVVIIT GCFSYYQEAK SSKIMESFKN MVPQQALVIR EGEKMQVNAE EVVVGDLVEI 240
  241 KGGDRVPADL RIISAHGCKV DNSSLTGESE PQTRSPDCTH DNPLETRNIT FFSTNCVEGT 300
  301 ARGVVVATGD RTVMGRIATL ASGLEVGKTP IAIEIEHFIQ LITGVAVFLG VSFFILSLIL 360
  361 GYTWLEAVIF LIGIIVANVP EGLLATVTVC LTLTAKRMAR KNCLVKNLEA VETLGSTSTI 420
  421 CSDKTGTLTQ NRMTVAHMWF DNQIHEADTT EDQSGTSFDK SSHTWVALSH IAGLCNRAVF 480
  481 KGGQDNIPVL KRDVAGDASE SALLKCIELS SGSVKLMRER NKKVAEIPFN STNKYQLSIH 540
  541 ETEDPNDNRY LLVMKGAPER ILDRCSTILL QGKEQPLDEE MKEAFQNAYL ELGGLGERVL 600
  601 GFCHYYLPEE QFPKGFAFDC DDVNFTTDNL CFVGLMSMID PPRAAVPDAV GKCRSAGIKV 660
  661 IMVTGDHPIT AKAIAKGVGI ISEGNETVED IAARLNIPVS QVNPRDAKAC VIHGTDLKDF 720
  721 TSEQIDEILQ NHTEIVFART SPQQKLIIVE GCQRQGAIVA VTGDGVNDSP ALKKADIGVA 780
  781 MGIAGSDVSK QAADMILLDD NFASIVTGVE EGRLIFDNLK KSIAYTLTSN IPEITPFLLF 840
  841 IMANIPLPLG TITILCIDLG TDMVPAISLA YEAAESDIMK RQPRNPRTDK LVNERLISMA 900
  901 YGQIGMIQAL GGFFSYFVIL AENGFLPSNL VGIRLNWDDR TVNDLEDSYG QQWNLPPVRS 960
  961 GAWSPAPPWS LSRASWWFCA FPYSFLIFVY DEIRKLILRR NPGGWVEKET YY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle