YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73947986
Protein type:	Transmembrane
Type Confidence:	0.86
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPLVCVTAR CGGCGDDIRG LQPGGPSPLR DSRPCKRAQE VMETRQVPRS PRMRLLLLLL  60
   61 LLLVPWGHRS ASGVALPPAG VLSLRAPGRA WAGPATPLSR RSLALADDAA FRERARLLAA 120
  121 LERRHWLNSY MHKLLVLDAR

Type	Start	End	Confidence
Cytoplasmic	1	54	0.82
Transmembrane Helix	55	72	0.76
Non-Cytoplasmic	73	140	0.80