YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73947617
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMWSNFFMQE EDRRRREAAG RRRAQGQHQL TPEREGKIKL GLLLSAVGAT LAVLAVGTEF  60
   61 WVELNTYKTN GSAVCEAAHL GLWKMCTKRL WQADLPEGRD TCGPAELPGE ANCTYFKFFT 120
  121 TGENARIFQR TTKKEVNLAA AVIAVLGLAV MALGCLCIIM VLSKGAEFLL RVGAVCFGLS 180
  181 GLLLLVSLEV FRHAVQALLQ RVSDENPPAP ALTYEYSWSL GCGVGASLVL LLGAGCFFLL 240
  241 TLPTWPWGSL CPKQGPRDT

Type	Start	End	Confidence
Cytoplasmic	1	39	0.93
Transmembrane Helix	40	61	0.83
Non-Cytoplasmic	62	137	0.84
Transmembrane Helix	138	162	0.91
Cytoplasmic	163	167	0.80
Transmembrane Helix	168	191	0.87
Non-Cytoplasmic	192	219	0.78
Transmembrane Helix	220	242	0.88
Cytoplasmic	243	259	0.74